RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ZMAT2Q96NC0 199 aaKnown RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 NT5C1BQ96P26 610 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 SPAG5Q96R06 1193 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 EIF3CQ99613 913 aaKnown RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 DESI2Q9BSY9 194 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 CCDC94Q9BW85 323 aaPredicted RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 MTMR12Q9C0I1 747 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 XYLT2Q9H1B5 865 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 RNF39Q9H2S5 420 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 NXF3Q9H4D5 531 aaKnown RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 HAUS4Q9H6D7 363 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 PLEKHA5Q9HAU0 1116 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 CHST12Q9NRB3 414 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 ZNHIT6Q9NWK9 470 aaKnown RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 TRMT1Q9NXH9 659 aaKnown RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 SIX4Q9UIU6 781 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 PADI3Q9ULW8 664 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 NENFQ9UMX5 172 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 PIN4Q9Y237 131 aaKnown RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 HES2Q9Y543 173 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 NUB1Q9Y5A7 615 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 UMODL1Q5DID0 1318 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 PTPRSQ13332 1948 aa6.46□□□□□ -1.37
SDC4P-201ENST00000453285 LTBP2Q14767 1821 aa6.46□□□□□ -1.37
SDC4P-201ENST00000453285 TULP1O00294 542 aaPredicted RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 GPR182O15218 404 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 EVI5O60447 810 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 MGEA5O60502 916 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 ZNF623O75123 536 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 PHACTR2O75167 634 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 RECQL4O94761 1208 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 GFPT2O94808 682 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 ABL1P00519 1130 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 TNNC2P02585 160 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 CCDC175P0C221 793 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 TMEM191BP0C7N4 346 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 GHRP10912 638 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 COL6A1P12109 1028 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 ACO1P21399 889 aaKnown RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 AKAP5P24588 427 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 CD52P31358 61 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 CLCN1P35523 988 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 CYLC1P35663 651 aaPredicted RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 ARHGAP25P42331 645 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 PIK3CAP42336 1068 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 GUCY2FP51841 1108 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 KIF11P52732 1056 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 MFAP3P55082 362 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 TFAMQ00059 246 aaKnown RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 GCNT1Q02742 428 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 ARID5AQ03989 594 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 PTK2Q05397 1052 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 KLHL30Q0D2K2 578 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 NFX1Q12986 1120 aaKnown RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 BIRC3Q13489 604 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 TMEM132DQ14C87 1099 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 PKN2Q16513 984 aaKnown RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 SGSM1Q2NKQ1 1148 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 SLC39A5Q6ZMH5 540 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 ZNF662Q6ZS27 426 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 NYAP1Q6ZVC0 841 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 APBB1IPQ7Z5R6 666 aaPredicted RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 MRPL10Q7Z7H8 261 aaKnown RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 RTN4RL1Q86UN2 441 aaPredicted RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 PPM1KQ8N3J5 372 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 USP38Q8NB14 1042 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 SLC30A5Q8TAD4 765 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 U2AF1L4Q8WU68 220 aaKnown RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 ANKRD36BP1Q96IX9 119 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 CCDC42Q96M95 316 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 ARID3AQ99856 593 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 TRAIPQ9BWF2 469 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 FAM105AQ9NUU6 356 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 CNTN3Q9P232 1028 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 CNTN6Q9UQ52 1028 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 NOD1Q9Y239 953 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 DERAQ9Y315 318 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 C2CD2Q9Y426 696 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 IPPQ9Y573 584 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 BZW2Q9Y6E2 419 aaKnown RBP6.46□□□□□ -1.38
SDC4P-201ENST00000453285 VWA8A3KMH1 1905 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 PTPRDP23468 1912 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 TSC2P49815 1807 aa6.46□□□□□ -1.38
SDC4P-201ENST00000453285 A0A087X0T9 212 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 SMIM28A0A1B0GU29 152 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 RCCD1A6NED2 376 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 DDX3XO00571 662 aaKnown RBP eCLIP6.45□□□□□ -1.38
SDC4P-201ENST00000453285 PTGESO14684 152 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 ZSCAN12O43309 604 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 STAU1O95793 577 aaKnown RBP6.45□□□□□ -1.38
SDC4P-201ENST00000453285 ITGB3P05106 788 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 FAM228BP0C875 321 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 HSPA1AP0DMV8 641 aaKnown RBP6.45□□□□□ -1.38
SDC4P-201ENST00000453285 HSPA1BP0DMV9 641 aaKnown RBP6.45□□□□□ -1.38
SDC4P-201ENST00000453285 KCNE1P15382 129 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 ATF7P17544 494 aaPredicted RBP6.45□□□□□ -1.38
SDC4P-201ENST00000453285 CHRNB2P17787 502 aa6.45□□□□□ -1.38
SDC4P-201ENST00000453285 ANXA13P27216 316 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms