RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 KCTD10Q9H3F6 313 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 MTMR7Q9Y216 660 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 CASZ1Q86V15 1759 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 KIF13AQ9H1H9 1805 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 TXNDC9O14530 226 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 ADAMTS2O95450 1211 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 TROVE2P10155 538 aaKnown RBP eCLIP19.76■□□□□ 0.75
PTPA-223ENST00000452489 VCLP18206 1134 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 NR2F2P24468 414 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 COG7P83436 770 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 CC2D2BQ6DHV5 1058 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 CYP4F22Q6NT55 531 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 SLC13A5Q86YT5 568 aaPredicted RBP19.76■□□□□ 0.75
PTPA-223ENST00000452489 ATP11CQ8NB49 1132 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 ZFP28Q8NHY6 868 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 SCFD1Q8WVM8 642 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 MKNK1Q9BUB5 465 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 DNAJC18Q9H819 358 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.76■□□□□ 0.758e-7■■■■■ 148.9
PTPA-223ENST00000452489 UBAP1Q9NZ09 502 aa19.76■□□□□ 0.75
PTPA-223ENST00000452489 PRPF4O43172 522 aaKnown RBP eCLIP19.75■□□□□ 0.752e-7■■■□□ 15.4
PTPA-223ENST00000452489 GCAP28676 217 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 ASPHQ12797 758 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 EPHA7Q15375 998 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 ECM1Q16610 540 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 CCDC62Q6P9F0 684 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 FBXL19Q6PCT2 694 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 LVRNQ6Q4G3 990 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 RNF207Q6ZRF8 634 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 SHKBP1Q8TBC3 707 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 SRPK1Q96SB4 655 aaKnown RBP19.75■□□□□ 0.75
PTPA-223ENST00000452489 KIAA1586Q9HCI6 787 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 ASAP1Q9ULH1 1129 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 H3BRJ5 948 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 CHN2P52757 468 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 NR1H3Q13133 447 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 UGT2A3Q6UWM9 527 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 SKA1Q96BD8 255 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 MRRFQ96E11 262 aaKnown RBP19.75■□□□□ 0.75
PTPA-223ENST00000452489 AGAP3Q96P47 875 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 TUBB6Q9BUF5 446 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 ZDHHC7Q9NXF8 308 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 GCNT4Q9P109 453 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 MTUS1Q9ULD2 1270 aa19.75■□□□□ 0.75
PTPA-223ENST00000452489 HEMK1Q9Y5R4 338 aaPredicted RBP19.75■□□□□ 0.75
PTPA-223ENST00000452489 B2RBV5 119 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 GCP02774 474 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 KRT15P19012 456 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 IVDP26440 423 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 HALP42357 657 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 NCOA4Q13772 614 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 PUM3Q15397 648 aaKnown RBP19.74■□□□□ 0.75
PTPA-223ENST00000452489 DAGLBQ8NCG7 672 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 SNX29Q8TEQ0 813 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 SNF8Q96H20 258 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 GRIP2Q9C0E4 1043 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 RBM38Q9H0Z9 239 aaKnown RBP19.74■□□□□ 0.75
PTPA-223ENST00000452489 UBR1Q8IWV7 1749 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 C15orf38-AP3S2A0A0A6YYH1 394 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 POC1B-GALNT4F8VUJ3 575 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 ITIH2P19823 946 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 LMNB1P20700 586 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 COMTP21964 271 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 STAT1P42224 750 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 ACTR3P61158 418 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 DYNLL1P63167 89 aaKnown RBP19.74■□□□□ 0.75
PTPA-223ENST00000452489 STAT4Q14765 748 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 MMEL1Q495T6 779 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 RNF111Q6ZNA4 994 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 NET1Q7Z628 596 aaPredicted RBP19.74■□□□□ 0.75
PTPA-223ENST00000452489 ARPINQ7Z6K5 226 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 NUP93Q8N1F7 819 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 ARHGAP24Q8N264 748 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 ZNF398Q8TD17 642 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 OSBPL8Q9BZF1 889 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 C12orf65Q9H3J6 166 aaKnown RBP19.74■□□□□ 0.75
PTPA-223ENST00000452489 NIP7Q9Y221 180 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTPA-223ENST00000452489 PCDH11YQ9BZA8 1340 aa19.74■□□□□ 0.75
PTPA-223ENST00000452489 MAGEB6P1A0A0J9YX57 407 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 SLC5A2P31639 672 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 RPL5P46777 297 aaKnown RBP19.73■□□□□ 0.75
PTPA-223ENST00000452489 NONOQ15233 471 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTPA-223ENST00000452489 MYLK3Q32MK0 819 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 MDH1BQ5I0G3 518 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 C1orf146Q5VVC0 180 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 NEK8Q86SG6 692 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 DGKHQ86XP1 1220 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 DEPTORQ8TB45 409 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 ATG4AQ8WYN0 398 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 MAML3Q96JK9 1138 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 CCDC77Q9BR77 488 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 TBCCD1Q9NVR7 557 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 SLAIN2Q9P270 581 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 SLC7A8Q9UHI5 535 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 KAT6BQ8WYB5 2073 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 EXOC1LA0A1B0GW35 172 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 A0A1W2PPM1 405 aa19.73■□□□□ 0.75
PTPA-223ENST00000452489 MIF4GDA9UHW6 222 aaKnown RBP19.73■□□□□ 0.75
PTPA-223ENST00000452489 LSM1O15116 133 aaKnown RBP19.73■□□□□ 0.75
PTPA-223ENST00000452489 ADCY3O60266 1144 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms