RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PSMD5Q16401 504 aa26.91■■□□□ 1.9
RAPGEF1-206ENST00000438647 ZBTB41Q5SVQ8 909 aa26.91■■□□□ 1.9
RAPGEF1-206ENST00000438647 RARS2Q5T160 578 aaKnown RBP26.91■■□□□ 1.9
RAPGEF1-206ENST00000438647 SYCP3Q8IZU3 236 aa26.91■■□□□ 1.9
RAPGEF1-206ENST00000438647 HDAC7Q8WUI4 952 aa26.91■■□□□ 1.9
RAPGEF1-206ENST00000438647 NUB1Q9Y5A7 615 aa26.91■■□□□ 1.9
RAPGEF1-206ENST00000438647 LACTBL1A8MY62 500 aa26.9■■□□□ 1.9
RAPGEF1-206ENST00000438647 ADRB2P07550 413 aa26.9■■□□□ 1.9
RAPGEF1-206ENST00000438647 FGFR3P22607 806 aa26.9■■□□□ 1.9
RAPGEF1-206ENST00000438647 CMA1P23946 247 aa26.9■■□□□ 1.9
RAPGEF1-206ENST00000438647 CASP5P51878 434 aa26.9■■□□□ 1.9
RAPGEF1-206ENST00000438647 PRSS55Q6UWB4 352 aaPredicted RBP26.9■■□□□ 1.9
RAPGEF1-206ENST00000438647 C3orf58Q8NDZ4 430 aa26.9■■□□□ 1.9
RAPGEF1-206ENST00000438647 LNX1Q8TBB1 728 aaPredicted RBP26.9■■□□□ 1.9
RAPGEF1-206ENST00000438647 MAN1C1Q9NR34 630 aa26.9■■□□□ 1.9
RAPGEF1-206ENST00000438647 TISP43B9A030 160 aa26.89■■□□□ 1.9
RAPGEF1-206ENST00000438647 NUCB2P80303 420 aa26.89■■□□□ 1.9
RAPGEF1-206ENST00000438647 KCNA1Q09470 495 aa26.89■■□□□ 1.9
RAPGEF1-206ENST00000438647 ATAT1Q5SQI0 421 aa26.89■■□□□ 1.9
RAPGEF1-206ENST00000438647 CD300LGQ6UXG3 332 aa26.89■■□□□ 1.9
RAPGEF1-206ENST00000438647 C12orf76Q8N812 135 aaPredicted RBP26.89■■□□□ 1.9
RAPGEF1-206ENST00000438647 FAM212AQ96EL1 285 aa26.89■■□□□ 1.9
RAPGEF1-206ENST00000438647 PLEKHA4Q9H4M7 779 aa26.89■■□□□ 1.9
RAPGEF1-206ENST00000438647 TUBGCP4Q9UGJ1 667 aa26.89■■□□□ 1.9
RAPGEF1-206ENST00000438647 LRPAP1P30533 357 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 BRCC3P46736 316 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 ACOT2P49753 483 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 SPAG1Q07617 926 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 ZBTB6Q15916 424 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 ANKS3Q6ZW76 656 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 UNC13DQ70J99 1090 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 PALB2Q86YC2 1186 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 ASB7Q9H672 318 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 USP25Q9UHP3 1055 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 DERAQ9Y315 318 aa26.88■■□□□ 1.89
RAPGEF1-206ENST00000438647 PDCD11Q14690 1871 aaKnown RBP26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 SYN3O14994 580 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 TGM5O43548 720 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 LDHAP00338 332 aaKnown RBP26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 SLFN14P0C7P3 912 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 RPL17P18621 184 aaKnown RBP26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 GARTP22102 1010 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 ADSSP30520 456 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 FAM26FQ5R3K3 315 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 TMC5Q6UXY8 1006 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 C15orf39Q6ZRI6 1047 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 GLYCTKQ8IVS8 523 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 BEST2Q8NFU1 509 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 CMASQ8NFW8 434 aaPredicted RBP26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 RPGRIP1Q96KN7 1286 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 CLSTN3Q9BQT9 956 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 FGFBP2Q9BYJ0 223 aa26.87■■□□□ 1.89
RAPGEF1-206ENST00000438647 LOC730098B7Z3J9 87 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 EIF3DO15371 548 aaKnown RBP eCLIP26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 PRPF6O94906 941 aaKnown RBP26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 PFKFB1P16118 471 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 IGFBP6P24592 240 aaPredicted RBP26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 TKTP29401 623 aaKnown RBP26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 MCM4P33991 863 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 AFMP43652 599 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 CYP26C1Q6V0L0 522 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 GPR149Q86SP6 731 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 CHAMP1Q96JM3 812 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 IKZF4Q9H2S9 585 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 MTRRQ9UBK8 725 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 C2CD2Q9Y426 696 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 NR2E1Q9Y466 385 aa26.86■■□□□ 1.89
RAPGEF1-206ENST00000438647 A0A1B0GVL5 298 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 PVALEFA0A1B0GWK0 134 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 I3L4J1 428 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 ALADP13716 330 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 TMEM132DQ14C87 1099 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 SPATA1Q5VX52 437 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 LILRA6Q6PI73 481 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 SUSD3Q96L08 255 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 BLZF1Q9H2G9 400 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 POMKQ9H5K3 350 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 SERTAD1Q9UHV2 236 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 HPSEQ9Y251 543 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 BACE2Q9Y5Z0 518 aa26.85■■□□□ 1.89
RAPGEF1-206ENST00000438647 KIAA0391O15091 583 aaKnown RBP26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 ACTN4O43707 911 aaKnown RBP26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 IL18RAPO95256 599 aa26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 JADE1Q6IE81 842 aa26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 KREMEN2Q8NCW0 462 aa26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 APPL2Q8NEU8 664 aa26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 HPS3Q969F9 1004 aa26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 C1QTNF1Q9BXJ1 281 aa26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 RHOBTB2Q9BYZ6 727 aa26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 CDH22Q9UJ99 828 aa26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 VWA8A3KMH1 1905 aa26.84■■□□□ 1.89
RAPGEF1-206ENST00000438647 A0A1W2PQ27 194 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 A0A1W2PQ64 194 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 A0A1W2PQD8 194 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 H7C4K7 107 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 PAX3P23760 479 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 SYKP43405 635 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 CUL4BQ13620 913 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 KANK3Q6NY19 840 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 ARMCX5Q6P1M9 558 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms