RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 C4orf50Q6ZRC1 276 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 OTOP1Q7RTM1 612 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 NLRP9Q7RTR0 991 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 MFN1Q8IWA4 741 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 GALNT15Q8N3T1 639 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 ATL2Q8NHH9 583 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 LRRC8CQ8TDW0 803 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 EEF2P13639 858 aaKnown RBP17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 CYP11B1P15538 503 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 MARK3P27448 753 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 CAV1Q03135 178 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 SLFN13Q68D06 897 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 PTF1AQ7RTS3 328 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 CADM1Q9BY67 442 aaKnown RBP17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 DCLRE1BQ9H816 532 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 UVRAGQ9P2Y5 699 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 IGLV3-22A0A075B6J6 115 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 TRAFD1O14545 582 aaPredicted RBP17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 KRT36O76013 467 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 RALAP11233 206 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 BMP3P12645 472 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 KRT15P19012 456 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 MUTP22033 750 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 CA4P22748 312 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 PTPN4P29074 926 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 RCN2Q14257 317 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 RCN1Q15293 331 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 CTC1Q2NKJ3 1217 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 DAW1Q8N136 415 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 SPIRE2Q8WWL2 714 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 DHX38Q92620 1227 aaKnown RBP17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 SEMA4DQ92854 862 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 AMNQ9BXJ7 453 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 TMEM117Q9H0C3 514 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 SAYSD1Q9NPB0 183 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 ZNFX1Q9P2E3 1918 aaKnown RBP17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 A0A1W2PPM1 405 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 K7ENM7 598 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 SMAPO00193 183 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 MAPK4P31152 587 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 CIITAP33076 1130 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 RPS6KA3P51812 740 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 UBXN2AP68543 259 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 CDR2Q01850 454 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 CETN1Q12798 172 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 TBC1D10BQ4KMP7 808 aaPredicted RBP17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 SNX30Q5VWJ9 437 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 SYDE1Q6ZW31 735 aaPredicted RBP17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 ANKS1BQ7Z6G8 1248 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 SLC9A9Q8IVB4 645 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 SLF2Q8IX21 1173 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 GLIS1Q8NBF1 620 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 GRK7Q8WTQ7 553 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 PLVAPQ9BX97 442 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 WDR35Q9P2L0 1181 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 DCTN4Q9UJW0 460 aa17.7■□□□□ 0.42
NPC1L1-203ENST00000423141 A0A1B0GVG6 124 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 GNPATO15228 680 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 CNGA1P29973 690 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 GTF2IP78347 998 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 OVGP1Q12889 678 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 P3H1Q32P28 736 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 PCNX4Q63HM2 1172 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 RGS9BPQ6ZS82 235 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 C15orf52Q6ZUT6 534 aaKnown RBP17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 ZNF365Q70YC5 407 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 CLNKQ7Z7G1 428 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 IFT43Q96FT9 208 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 TLE6Q9H808 572 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 CYLDQ9NQC7 956 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 KANSL3Q9P2N6 904 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 STK24Q9Y6E0 443 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 UBE4BO95155 1302 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 FOCADQ5VW36 1801 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 WNK3Q9BYP7 1800 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 WDR91A4D1P6 747 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 PRPF4O43172 522 aaKnown RBP eCLIP17.69■□□□□ 0.422e-8■■■■□ 20.5
NPC1L1-203ENST00000423141 MXI1P50539 228 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 RASSF2P50749 326 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 CCDC6Q16204 474 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 ZFPM1Q8IX07 1006 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 SCG3Q8WXD2 468 aaKnown RBP17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 DDX27Q96GQ7 796 aaKnown RBP17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 PRR11Q96HE9 360 aaPredicted RBP17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 STRA6Q9BX79 667 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 PPP1R12CQ9BZL4 782 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 C12orf65Q9H3J6 166 aaKnown RBP17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 SEL1LQ9UBV2 794 aa17.69■□□□□ 0.42
NPC1L1-203ENST00000423141 COL14A1Q05707 1796 aaKnown RBP17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 GOLGA8IPA6NC78 632 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 GOLGA8JA6NMD2 632 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 PIAS1O75925 651 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 RTN3O95197 1032 aaPredicted RBP17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 VHLP40337 213 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 IKQ13123 557 aaPredicted RBP17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 KPNB1Q14974 876 aaKnown RBP17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 ACSBG2Q5FVE4 666 aa17.68■□□□□ 0.42
NPC1L1-203ENST00000423141 FBXO11Q86XK2 927 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms