RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 PLS3P13797 630 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 SMTNP53814 917 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 ROR1Q01973 937 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 NOLC1Q14978 699 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTCD1-202ENST00000419981 VARS2Q5ST30 1063 aaKnown RBP18.91■□□□□ 0.62
PTCD1-202ENST00000419981 KCTD17Q8N5Z5 321 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 SYT2Q8N9I0 419 aaPredicted RBP18.91■□□□□ 0.62
PTCD1-202ENST00000419981 ZNF461Q8TAF7 563 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 SPIRE2Q8WWL2 714 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 CDK5RAP3Q96JB5 506 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 ZBTB45Q96K62 511 aaPredicted RBP18.91■□□□□ 0.62
PTCD1-202ENST00000419981 PNMA5Q96PV4 448 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 RPP25Q9BUL9 199 aaKnown RBP18.91■□□□□ 0.62
PTCD1-202ENST00000419981 KCND2Q9NZV8 630 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 KCNH3Q9ULD8 1083 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 NUB1Q9Y5A7 615 aa18.91■□□□□ 0.62
PTCD1-202ENST00000419981 ZNF638Q14966 1978 aaKnown RBP18.91■□□□□ 0.62
PTCD1-202ENST00000419981 DENND4CQ5VZ89 1909 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 VWA3AA6NCI4 1184 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 H3BQV1 296 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 SYN3O14994 580 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 TOM1L1O75674 476 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 GJB2P29033 226 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 ELF1P32519 619 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 RPL9P32969 192 aaKnown RBP18.9■□□□□ 0.62
PTCD1-202ENST00000419981 GPC5P78333 572 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 SPECC1Q5M775 1068 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 SLC8B1Q6J4K2 584 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 NPAS3Q8IXF0 933 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 TMEM161BQ8NDZ6 487 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 ING5Q8WYH8 240 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 C18orf25Q96B23 403 aaPredicted RBP18.9■□□□□ 0.62
PTCD1-202ENST00000419981 SHDQ96IW2 340 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 PLIN2Q99541 437 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 SIT1Q9Y3P8 196 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 COL4A2P08572 1712 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 SCN1AP35498 2009 aa18.9■□□□□ 0.62
PTCD1-202ENST00000419981 WDR27A2RRH5 827 aa18.89■□□□□ 0.61
PTCD1-202ENST00000419981 H7C4K7 107 aa18.89■□□□□ 0.61
PTCD1-202ENST00000419981 LRG1P02750 347 aa18.89■□□□□ 0.61
PTCD1-202ENST00000419981 DCNP07585 359 aaKnown RBP18.89■□□□□ 0.61
PTCD1-202ENST00000419981 SLC12A3P55017 1021 aa18.89■□□□□ 0.61
PTCD1-202ENST00000419981 ARL6IP4Q66PJ3 421 aaKnown RBP18.89■□□□□ 0.61
PTCD1-202ENST00000419981 ZPBP2Q6X784 338 aa18.89■□□□□ 0.61
PTCD1-202ENST00000419981 TMX3Q96JJ7 454 aa18.89■□□□□ 0.61
PTCD1-202ENST00000419981 KXD1Q9BQD3 176 aa18.89■□□□□ 0.61
PTCD1-202ENST00000419981 MRPS23Q9Y3D9 190 aaKnown RBP18.89■□□□□ 0.61
PTCD1-202ENST00000419981 KIF26AQ9ULI4 1882 aaPredicted RBP18.88■□□□□ 0.61
PTCD1-202ENST00000419981 PTPRZ1P23471 2315 aaPredicted RBP18.88■□□□□ 0.61
PTCD1-202ENST00000419981 ARHGEF37A1IGU5 675 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 PRRG1O14668 218 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 MEFVO15553 781 aaPredicted RBP18.88■□□□□ 0.61
PTCD1-202ENST00000419981 ABLIM3O94929 683 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 RHOP08100 348 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 PLA2G4BP0C869 781 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 MAPTP10636 758 aaKnown RBP18.88■□□□□ 0.61
PTCD1-202ENST00000419981 MCM4P33991 863 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 MATR3P43243 847 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTCD1-202ENST00000419981 ARPP19P56211 112 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 STARD6P59095 220 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 SLC10A6Q3KNW5 377 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 SEZ6Q53EL9 994 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 PJA1Q8NG27 643 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 SUSD3Q96L08 255 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 FOXQ1Q9C009 403 aa18.88■□□□□ 0.61
PTCD1-202ENST00000419981 LARSQ9P2J5 1176 aaKnown RBP18.88■□□□□ 0.61
PTCD1-202ENST00000419981 RIF1Q5UIP0 2472 aaKnown RBP18.88■□□□□ 0.61
PTCD1-202ENST00000419981 H0YCG3 227 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 CLDN3O15551 220 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 TBC1D4O60343 1298 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 ATF2P15336 505 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 PTPN2P17706 415 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 PFKPQ01813 784 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 MCL1Q07820 350 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 SNW1Q13573 536 aaKnown RBP18.87■□□□□ 0.61
PTCD1-202ENST00000419981 MLF2Q15773 248 aaPredicted RBP18.87■□□□□ 0.61
PTCD1-202ENST00000419981 SLC5A9Q2M3M2 681 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 CTXN3Q4LDR2 81 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 TMEM119Q4V9L6 283 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 ZNF280DQ6N043 979 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 BICD1Q96G01 975 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 CYP4F11Q9HBI6 524 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 AVENQ9NQS1 362 aaPredicted RBP18.87■□□□□ 0.61
PTCD1-202ENST00000419981 DLGAP2Q9P1A6 1054 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 FBXL5Q9UKA1 691 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 DMDP11532 3685 aa18.87■□□□□ 0.61
PTCD1-202ENST00000419981 CENPBP07199 599 aaPredicted RBP18.86■□□□□ 0.61
PTCD1-202ENST00000419981 CXCL8P10145 99 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 NCKAP1LP55160 1127 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 CACNB1Q02641 598 aaPredicted RBP18.86■□□□□ 0.61
PTCD1-202ENST00000419981 PRKCQQ04759 706 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 MRPL58Q14197 206 aaKnown RBP18.86■□□□□ 0.61
PTCD1-202ENST00000419981 TPGS2Q68CL5 300 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 TCEAL8Q8IYN2 117 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 ADSSL1Q8N142 457 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 MCRS1Q96EZ8 462 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 AK8Q96MA6 479 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 TBC1D32Q96NH3 1257 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 GDE1Q9NZC3 331 aa18.86■□□□□ 0.61
PTCD1-202ENST00000419981 TUBGCP4Q9UGJ1 667 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms