RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 MUM1L1Q5H9M0 696 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 TMC6Q7Z403 805 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-207ENST00000419472 TTC7BQ86TV6 843 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 FBXO11Q86XK2 927 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 HIPK4Q8NE63 616 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 GPR62Q9BZJ7 368 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 UCKL1Q9NWZ5 548 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 TBC1D29Q9UFV1 150 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 CFAP20Q9Y6A4 193 aaKnown RBP5.77□□□□□ -1.49
VPS13A-207ENST00000419472 NWD1Q149M9 1564 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 ISM1B1AKI9 464 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 FAM229AH3BQW9 127 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 FAM87AP0C7U9 286 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 THBS2P35442 1172 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 ADCY2Q08462 1091 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 RAB30Q15771 203 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 TTC38Q5R3I4 469 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 CDKAL1Q5VV42 579 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 KIAA1841Q6NSI8 718 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 CNKSR3Q6P9H4 555 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 FAM47EQ6ZV65 393 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 NME9Q86XW9 330 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 MFSD4AQ8N468 514 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 GLIS1Q8NBF1 620 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 ACDQ96AP0 544 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 MTFMTQ96DP5 389 aaKnown RBP5.77□□□□□ -1.49
VPS13A-207ENST00000419472 CLPTM1LQ96KA5 538 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 MRGPRX1Q96LB2 322 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 MTG2Q9H4K7 406 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 KCND1Q9NSA2 647 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 PLA2G2EQ9NZK7 142 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 ORC3Q9UBD5 711 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-207ENST00000419472 ADGRE2Q9UHX3 823 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 ARHGAP26Q9UNA1 814 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 U3KQE9 123 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 MYPNQ86TC9 1320 aa5.77□□□□□ -1.49
VPS13A-207ENST00000419472 NUP155O75694 1391 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 A0A087X0M5 115 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 A0A1B0GX30 115 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 ZBED4O75132 1171 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 RARBP10826 455 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 TYRP14679 529 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 CALRP27797 417 aaKnown RBP5.76□□□□□ -1.49
VPS13A-207ENST00000419472 HSPA1LP34931 641 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 WASP42768 502 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 KIR3DL1P43629 444 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 FLT3LGP49771 235 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 GRIN1Q05586 938 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 KHDC1LQ5JSQ8 128 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 SHISA2Q6UWI4 295 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 FAM71BQ8TC56 605 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 GAB3Q8WWW8 586 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 EDARADDQ8WWZ3 215 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 RSPH1Q8WYR4 309 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 FATE1Q969F0 183 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 IQCDQ96DY2 449 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 TRIM11Q96F44 468 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 ADI1Q9BV57 179 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-207ENST00000419472 PNPOQ9NVS9 261 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 AFF4Q9UHB7 1163 aaKnown RBP5.76□□□□□ -1.49
VPS13A-207ENST00000419472 COA3Q9Y2R0 106 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-207ENST00000419472 KIF1BO60333 1816 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 SSU72P8A0A1W2PR75 194 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 PRAMEF22A3QJZ6 481 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 AHSGP02765 367 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 ZSCAN22P10073 491 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-207ENST00000419472 PNLIPRP1P54315 467 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 CASP6P55212 293 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 TARDBPQ13148 414 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS13A-207ENST00000419472 MAPK7Q13164 816 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 PTK2BQ14289 1009 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 NOLC1Q14978 699 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS13A-207ENST00000419472 PLCB4Q15147 1175 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 CFAP58Q5T655 872 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 SLC9C2Q5TAH2 1124 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 PRAMEF18Q5VWM3 479 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 TIGD7Q6NT04 549 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-207ENST00000419472 FBXO38Q6PIJ6 1188 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 CCDC129Q6ZRS4 1044 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 CHD1LQ86WJ1 897 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 C3orf20Q8ND61 904 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 RADILQ96JH8 1075 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 MAP7D2Q96T17 732 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 NSFL1CQ9UNZ2 370 aaKnown RBP5.76□□□□□ -1.49
VPS13A-207ENST00000419472 TMEM2Q9UHN6 1383 aa5.76□□□□□ -1.49
VPS13A-207ENST00000419472 GOLGA6L22H0YM25 854 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 MAPK4P31152 587 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 STAT1P42224 750 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 TRPC3Q13507 836 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 TSTQ16762 297 aaKnown RBP5.75□□□□□ -1.49
VPS13A-207ENST00000419472 ANKRD45Q5TZF3 282 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 KIAA1614Q5VZ46 1190 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 STEAP3Q658P3 488 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 ANKRD34AQ69YU3 496 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 SLFN12LQ6IEE8 588 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 TSPYL5Q86VY4 417 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-207ENST00000419472 SPNS2Q8IVW8 549 aa5.75□□□□□ -1.49
VPS13A-207ENST00000419472 TRMT2AQ8IZ69 625 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms