RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 DPP3Q9NY33 737 aa28.02■■■□□ 2.08
RHBDD3-203ENST00000413137 SIK3Q9Y2K2 1263 aa28.02■■■□□ 2.08
RHBDD3-203ENST00000413137 TNRC18O15417 2968 aaPredicted RBP28.01■■■□□ 2.07
RHBDD3-203ENST00000413137 EFCAB14O75071 495 aa28.01■■■□□ 2.07
RHBDD3-203ENST00000413137 TNNC2P02585 160 aa28.01■■■□□ 2.07
RHBDD3-203ENST00000413137 AMHP03971 560 aa28.01■■■□□ 2.07
RHBDD3-203ENST00000413137 FAM117BQ6P1L5 589 aa28.01■■■□□ 2.07
RHBDD3-203ENST00000413137 PSRC1Q6PGN9 363 aaPredicted RBP28.01■■■□□ 2.07
RHBDD3-203ENST00000413137 NT5DC4Q86YG4 428 aa28.01■■■□□ 2.07
RHBDD3-203ENST00000413137 CACTINQ8WUQ7 758 aaKnown RBP28.01■■■□□ 2.07
RHBDD3-203ENST00000413137 COQ4Q9Y3A0 265 aa28.01■■■□□ 2.07
RHBDD3-203ENST00000413137 PPEF2O14830 753 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 PMM2O15305 246 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 B4GALT3O60512 393 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 HLA-DRAP01903 254 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 ITGB3P05106 788 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 THP07101 528 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 AP3M2P53677 418 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 NOMO2Q5JPE7 1267 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 DPY19L2P1Q6NXN4 242 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 ERGIC2Q96RQ1 377 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 PI4K2AQ9BTU6 479 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 GCNT4Q9P109 453 aa28■■■□□ 2.07
RHBDD3-203ENST00000413137 UBQLN1Q9UMX0 589 aaKnown RBP28■■■□□ 2.07
RHBDD3-203ENST00000413137 N4BP1O75113 896 aaKnown RBP27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 CAPN15O75808 1086 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 IGFBP6P24592 240 aaPredicted RBP27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 PON1P27169 355 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 GBP6Q6ZN66 633 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 ZNF280BQ86YH2 543 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 HERVK_113Q902F9 699 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 MRFAP1L1Q96HT8 127 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 HCSTQ9UBK5 93 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 GTPBP10A4D1E9 387 aaKnown RBP27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 P4HA2O15460 535 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 PHACTR2O75167 634 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 NCOA4Q13772 614 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 EXOC3L4Q17RC7 722 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 FBXL13Q8NEE6 735 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 BEST2Q8NFU1 509 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 RABGGTAQ92696 567 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 TSPAN18Q96SJ8 248 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 INTS2Q9H0H0 1204 aaKnown RBP27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 TBC1D13Q9NVG8 400 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 RAB20Q9NX57 234 aa27.99■■■□□ 2.07
RHBDD3-203ENST00000413137 PDE4DIPQ5VU43 2346 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 DGKIO75912 1065 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 DDHD2O94830 711 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 KRT19P08727 400 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 POLR2BP30876 1174 aaKnown RBP27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 KCNJ6P48051 423 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 MYL6P60660 151 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 C9orf50Q5SZB4 431 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 VSTM4Q8IW00 320 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 EHBP1Q8NDI1 1231 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 PAAF1Q9BRP4 392 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 SIX2Q9NPC8 291 aa27.98■■■□□ 2.07
RHBDD3-203ENST00000413137 TBKBP1A7MCY6 615 aa27.97■■■□□ 2.07
RHBDD3-203ENST00000413137 EPHB6O15197 1021 aa27.97■■■□□ 2.07
RHBDD3-203ENST00000413137 TPM3P06753 285 aa27.97■■■□□ 2.07
RHBDD3-203ENST00000413137 PIK3CAP42336 1068 aa27.97■■■□□ 2.07
RHBDD3-203ENST00000413137 GRIK3Q13003 919 aa27.97■■■□□ 2.07
RHBDD3-203ENST00000413137 PAN2Q504Q3 1202 aaKnown RBP27.97■■■□□ 2.07
RHBDD3-203ENST00000413137 ABI1Q8IZP0 508 aa27.97■■■□□ 2.07
RHBDD3-203ENST00000413137 LSM14BQ9BX40 385 aaKnown RBP27.97■■■□□ 2.07
RHBDD3-203ENST00000413137 AGAP1Q9UPQ3 857 aa27.97■■■□□ 2.07
RHBDD3-203ENST00000413137 PDCD11Q14690 1871 aaKnown RBP27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 COL4A6Q14031 1691 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 A0A1W2PQC6 194 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 CASTOR2A6NHX0 329 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 CYP3A5P20815 502 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 LRMPQ12912 555 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 C9orf57Q5W0N0 161 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 SPOPLQ6IQ16 392 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 TRIM65Q6PJ69 517 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 URGCPQ8TCY9 931 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 FAM207AQ9NSI2 230 aaPredicted RBP27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 SLC38A7Q9NVC3 462 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 ITGA11Q9UKX5 1188 aa27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 LAMA2P24043 3122 aaKnown RBP27.96■■■□□ 2.07
RHBDD3-203ENST00000413137 ANO9A1A5B4 782 aa27.95■■■□□ 2.07
RHBDD3-203ENST00000413137 H0YGN5 161 aa27.95■■■□□ 2.07
RHBDD3-203ENST00000413137 GJB7Q6PEY0 223 aa27.95■■■□□ 2.07
RHBDD3-203ENST00000413137 PCMTD1Q96MG8 357 aaPredicted RBP27.95■■■□□ 2.07
RHBDD3-203ENST00000413137 XYLT2Q9H1B5 865 aa27.95■■■□□ 2.07
RHBDD3-203ENST00000413137 RC3H2Q9HBD1 1191 aaKnown RBP27.95■■■□□ 2.07
RHBDD3-203ENST00000413137 APOBEC3GQ9HC16 384 aaKnown RBP27.95■■■□□ 2.07
RHBDD3-203ENST00000413137 HOXA2O43364 376 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 NOL4O94818 638 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 CETN1Q12798 172 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 TRPC3Q13507 836 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 TATDN2Q93075 761 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 ZNF689Q96CS4 500 aaPredicted RBP27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 DNAJB4Q9UDY4 337 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 RANBP2P49792 3224 aaKnown RBP27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 PTPRSQ13332 1948 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 PIRO00625 290 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 LRPAP1P30533 357 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 CLCNKBP51801 687 aa27.94■■■□□ 2.06
RHBDD3-203ENST00000413137 RBP5P82980 135 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms