RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 HAPLN2Q9GZV7 340 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 EPB41L4BQ9H329 900 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 ANKFY1Q9P2R3 1169 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 PTPN22Q9Y2R2 807 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 PCDHB4Q9Y5E5 795 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 BRCA1P38398 1863 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 FAM107AO95990 144 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 KCNJ1P48048 391 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 FSTL1Q12841 308 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 CALCOCO2Q13137 446 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 BYSLQ13895 437 aaKnown RBP12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 PPP1R7Q15435 360 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 SGO2Q562F6 1265 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 SPOPLQ6IQ16 392 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 MICALCLQ6ZW33 695 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 ART4Q93070 314 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 CYFIP2Q96F07 1278 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 VCPIP1Q96JH7 1222 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 CCT8L2Q96SF2 557 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 MRPL47Q9HD33 250 aaKnown RBP12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 PTPRJQ12913 1337 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 A0A087WUV0 522 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 GSTTP1A0A1W2PQM5 241 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 E7EVH7 732 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 MAN1A1P33908 653 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 SEC24CP53992 1094 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 PTP4A2Q12974 167 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 PRKG1Q13976 671 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 NEDD9Q14511 834 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 SLC29A2Q14542 456 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 FAM160B1Q5W0V3 765 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 ABRAQ8N0Z2 381 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 MYCBPAPQ8TBZ2 947 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 ZNF473Q8WTR7 871 aaKnown RBP12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 TLCD1Q96CP7 247 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 PGM2Q96G03 612 aa12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 CNOT10Q9H9A5 744 aaKnown RBP12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 PPANQ9NQ55 473 aaKnown RBP12.25□□□□□ -0.45
TRAFD1-202ENST00000412615 GMNCA6NCL1 334 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 ANKRD65E5RJM6 399 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 ADCY3O60266 1144 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 USP2O75604 605 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 CLTAP09496 248 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 RARGP13631 454 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 UBA1P22314 1058 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 GNA15P30679 374 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 STAT5BP51692 787 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 TARBP2Q15633 366 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 TMEM270Q6UE05 265 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 SYDE1Q6ZW31 735 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 MON1BQ7L1V2 547 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 C3orf20Q8ND61 904 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 PAGR1Q9BTK6 254 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 APOBEC3GQ9HC16 384 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 ADAM22Q9P0K1 906 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 CNTN6Q9UQ52 1028 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 DOCK5Q9H7D0 1870 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 ADGRA2Q96PE1 1338 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 CAND2O75155 1236 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 FARP2O94887 1054 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 PROSCO94903 275 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 SHBGP04278 402 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 PAEPP09466 180 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 TGFB3P10600 412 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 AP3M2P53677 418 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 C6orf118Q5T5N4 469 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 ZPBP2Q6X784 338 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 C1orf54Q8WWF1 131 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 PPM1EQ8WY54 764 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 IMPG2Q9BZV3 1241 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 TRIM7Q9C029 511 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 SEMA4AQ9H3S1 761 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 WHRNQ9P202 907 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 PPME1Q9Y570 386 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 MYH9P35579 1960 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 ATXN2Q99700 1313 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 CNTNAP2Q9UHC6 1331 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 MAFO75444 373 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 EDNRBP24530 442 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 TMOD1P28289 359 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 EFNA5P52803 228 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 NOP14P78316 857 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 ADCY2Q08462 1091 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 NCOA4Q13772 614 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 CAPSQ13938 189 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 ZBTB41Q5SVQ8 909 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 PHF13Q86YI8 300 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 RBBP8NLQ8NC74 664 aaPredicted RBP12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 GRK7Q8WTQ7 553 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 SEPT1Q8WYJ6 367 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 PCYT2Q99447 389 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 C11orf70Q9BRQ4 267 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 TMEM109Q9BVC6 243 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 HOMER3Q9NSC5 361 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 SCINQ9Y6U3 715 aa12.24□□□□□ -0.45
TRAFD1-202ENST00000412615 SSC5DA1L4H1 1573 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms