RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 PRUNE1Q86TP1 453 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 LENG1Q96BZ8 264 aaPredicted RBP13.36□□□□□ -0.27
ATG9A-203ENST00000409033 ERVK-5Q9HDB9 667 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 PARP2Q9UGN5 583 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 TCRBV7S2A1N4TA0A589 114 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 CELF2O95319 508 aaKnown RBP13.36□□□□□ -0.27
ATG9A-203ENST00000409033 LDHAP00338 332 aaKnown RBP13.36□□□□□ -0.27
ATG9A-203ENST00000409033 NEFHP12036 1026 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 KRT10P13645 584 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 RGS7P49802 495 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 NFX1Q12986 1120 aaKnown RBP13.36□□□□□ -0.27
ATG9A-203ENST00000409033 UAP1Q16222 522 aaPredicted RBP13.36□□□□□ -0.27
ATG9A-203ENST00000409033 ARMCX2Q7L311 632 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 ERICH1Q86X53 443 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 ANKRD42Q8N9B4 389 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 POLIQ9UNA4 740 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 NUB1Q9Y5A7 615 aa13.36□□□□□ -0.27
ATG9A-203ENST00000409033 CCDC188H7C350 402 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 PDHXO00330 501 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 MAP2K7O14733 419 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 STAM2O75886 525 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 KIAA0754O94854 1291 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 ADORA2AP29274 412 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 PSMC4P43686 418 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 RIOX2Q8IUF8 465 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 SLC9A9Q8IVB4 645 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 DNERQ8NFT8 737 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 BORCS6Q96GS4 357 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 FAM167AQ96KS9 214 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 SYNGAP1Q96PV0 1343 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 ECEL1O95672 775 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 ITGB3P05106 788 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 ATP4AP20648 1035 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 KCNT1Q5JUK3 1230 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 GPAT2Q6NUI2 795 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 GPRC5AQ8NFJ5 357 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 SCFD2Q8WU76 684 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 KIAA1586Q9HCI6 787 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.35□□□□□ -0.27
ATG9A-203ENST00000409033 PCDHB2Q9Y5E7 798 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 F5H423 210 aaPredicted RBP13.35□□□□□ -0.27
ATG9A-203ENST00000409033 PRLRP16471 622 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 RFX1P22670 979 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 SMAD1Q15797 465 aaKnown RBP13.35□□□□□ -0.27
ATG9A-203ENST00000409033 JAMLQ86YT9 394 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 EMC1Q8N766 993 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 UBA3Q8TBC4 463 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 ATP8B4Q8TF62 1192 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 TCP11Q8WWU5 503 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 HSPH1Q92598 858 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 EXOC4Q96A65 974 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 FAM49BQ9NUQ9 324 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 KLK14Q9P0G3 267 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 PNMA3Q9UL41 463 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 AGAP1Q9UPQ3 857 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 HES2Q9Y543 173 aa13.35□□□□□ -0.27
ATG9A-203ENST00000409033 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 CST3P01034 146 aaPredicted RBP13.34□□□□□ -0.27
ATG9A-203ENST00000409033 GARTP22102 1010 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 FLT3P36888 993 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 ATP13A4Q4VNC1 1196 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 ZSWIM1Q9BR11 485 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 RNPEPQ9H4A4 650 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 KCNG1Q9UIX4 513 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 ADCY3O60266 1144 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 LYPLA2O95372 231 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 GAS8O95995 478 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 YBX3P16989 372 aaKnown RBP eCLIP13.34□□□□□ -0.272e-7■■■■□ 22.9
ATG9A-203ENST00000409033 FOXR1Q6PIV2 292 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 B3GNT9Q6UX72 402 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.34□□□□□ -0.27
ATG9A-203ENST00000409033 FBXO25Q8TCJ0 367 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 ZNF516Q92618 1163 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 SMARCAD1Q9H4L7 1026 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 C17orf75Q9HAS0 396 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 TOM1L1O75674 476 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 NR1D1P20393 614 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 ACTN2P35609 894 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 GLE1Q53GS7 698 aaKnown RBP13.34□□□□□ -0.27
ATG9A-203ENST00000409033 C1orf220Q5T0J3 134 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 OR6B2Q6IFH4 312 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 CCDC33Q8N5R6 958 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 OR6J1Q8NGC5 347 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.34□□□□□ -0.27
ATG9A-203ENST00000409033 SHC3Q92529 594 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 SETD4Q9NVD3 440 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 RBPJLQ9UBG7 517 aa13.34□□□□□ -0.27
ATG9A-203ENST00000409033 PASKQ96RG2 1323 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 M0QYV0 167 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 PHKA2P46019 1235 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 ATP11AP98196 1134 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 IFRD2Q12894 506 aaPredicted RBP13.33□□□□□ -0.28
ATG9A-203ENST00000409033 KIF22Q14807 665 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 ACAD10Q6JQN1 1059 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 FOXR2Q6PJQ5 311 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 CCDC125Q86Z20 511 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 FAM71AQ8IYT1 594 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 LRRC57Q8N9N7 239 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 REPS2Q8NFH8 660 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 HELQQ8TDG4 1101 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms