RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ABHD2P08910 425 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 KCNE1P15382 129 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 CYP2C18P33260 490 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 TFDP2Q14188 446 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 DCAF17Q5H9S7 520 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 SPRYD7Q5W111 196 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 BZW1Q7L1Q6 419 aaKnown RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 OLIG1Q8TAK6 271 aa6.27□□□□□ -1.41
PTPRD-206ENST00000397617 OXCT2Q9BYC2 517 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-206ENST00000397617 C1RP00736 705 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 ATP5DP30049 168 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 CYP27A1Q02318 531 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 NELFCDQ8IXH7 590 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 GLG1Q92896 1179 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 CCDC113Q9H0I3 377 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 UBN1Q9NPG3 1134 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 GOLGA8KD6RF30 607 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 EPHB6O15197 1021 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 FAM189A1O60320 539 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 GRM5P41594 1212 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 RBP5P82980 135 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 DBN1Q16643 649 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 ZC3H12AQ5D1E8 599 aaKnown RBP6.26□□□□□ -1.41
PTPRD-206ENST00000397617 EFHC2Q5JST6 749 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 ACAD10Q6JQN1 1059 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 TINF2Q9BSI4 451 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 GJA3Q9Y6H8 435 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 FOXN3O00409 490 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-206ENST00000397617 BYSLQ13895 437 aaKnown RBP6.26□□□□□ -1.41
PTPRD-206ENST00000397617 CASP8Q14790 479 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 R3HDM1Q15032 1099 aaKnown RBP6.26□□□□□ -1.41
PTPRD-206ENST00000397617 PHLDB3Q6NSJ2 640 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 WHRNQ9P202 907 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 SOCS7O14512 581 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 FANCGO15287 622 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 MTSS1O43312 755 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 SMARCB1Q12824 385 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 CCNG2Q16589 344 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 C9orf131Q5VYM1 1079 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF449Q6P9G9 518 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 CD101Q93033 1021 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 CCDC77Q9BR77 488 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 BCO2Q9BYV7 579 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 GDF3Q9NR23 364 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 AP3B1O00203 1094 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 STIP1P31948 543 aaKnown RBP6.26□□□□□ -1.41
PTPRD-206ENST00000397617 SKOR1P84550 965 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 SREBF2Q12772 1141 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 MOGSQ13724 837 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 LRRC41Q15345 812 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF667Q5HYK9 610 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 SEL1L2Q5TEA6 688 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 RSPH3Q86UC2 560 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 SH3GL2Q99962 352 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 ERP44Q9BS26 406 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 MRGBPQ9NV56 204 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 GDAP2Q9NXN4 497 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 STK39Q9UEW8 545 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 ALG6Q9Y672 507 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 GOLGA6L10A6NI86 522 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 RSPH10B2B2RC85 870 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 C22orf31O95567 290 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 RSPH10BP0C881 870 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 RARGP13631 454 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 LRPAP1P30533 357 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 ACADSBP45954 432 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 PEX5P50542 639 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 MYO1EQ12965 1108 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 TERF2Q15554 542 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 SWSAP1Q6NVH7 229 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 MAP7D3Q8IWC1 876 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 KIRREL3Q8IZU9 778 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 ANKZF1Q9H8Y5 726 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 TTC3P53804 2025 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 BRWD1Q9NSI6 2320 aa6.26□□□□□ -1.41
PTPRD-206ENST00000397617 H3BRB1 525 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 RPL34P49207 117 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 DGKDQ16760 1214 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 TUT1Q9H6E5 874 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 UBQLN1Q9UMX0 589 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 PCDHAC2Q9Y5I4 1007 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 EGFRP00533 1210 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 MYCLP12524 364 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ITIH2P19823 946 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CASP4P49662 377 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ARHGAP1Q07960 439 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CALCOCO2Q13137 446 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 AGBL2Q5U5Z8 902 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CRYBG2Q8N1P7 616 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 TEKT4Q8WW24 435 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CENPTQ96BT3 561 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 DDX27Q96GQ7 796 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 WNK4Q96J92 1243 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 TMEM191BP0C7N4 346 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ADAM17P78536 824 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 BBS12Q6ZW61 710 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 PLEKHH3Q7Z736 793 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CCNJLQ8IV13 435 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 MSTO1Q9BUK6 570 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 PARVAQ9NVD7 372 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms