RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 AKT3Q9Y243 479 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 PCDHB7Q9Y5E2 793 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 TTC28Q96AY4 2481 aa6.85□□□□□ -1.31
PTPN20-208ENST00000395727 EYSQ5T1H1 3165 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 PLXNA4Q9HCM2 1894 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 GRM6O15303 877 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 CCNT1O60563 726 aaKnown RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 ZNF623O75123 536 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 BAG4O95429 457 aaKnown RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 EOMESO95936 686 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 ITGB2P05107 769 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 ITGB1P05556 798 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 ZSCAN20P17040 1043 aaPredicted RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 LAG3P18627 525 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 SFPQP23246 707 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 PPM1AP35813 382 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 RBM25P49756 843 aaKnown RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 RAB27AP51159 221 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 HMGN5P82970 282 aaKnown RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 POU5F1BQ06416 359 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 ST3GAL1Q11201 340 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 TCEAL5Q5H9L2 206 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 EARS2Q5JPH6 523 aaKnown RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 DIS3L2Q8IYB7 885 aaKnown RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 LRRC43Q8N309 656 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 LRRC71Q8N4P6 559 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 GALNT11Q8NCW6 608 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 SPPL3Q8TCT6 385 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 TCP11Q8WWU5 503 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 SLC7A3Q8WY07 619 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 ZSCAN31Q96LW9 406 aaPredicted RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 LXNQ9BS40 222 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 MRPL9Q9BYD2 267 aaKnown RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 BCO2Q9BYV7 579 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 GCOM2Q9BZD3 368 aaPredicted RBP6.84□□□□□ -1.31
PTPN20-208ENST00000395727 ZSWIM4Q9H7M6 989 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 ATP6V0A4Q9HBG4 840 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 GJB4Q9NTQ9 266 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 LIMCH1Q9UPQ0 1083 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 FAM50BQ9Y247 325 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 GINS2Q9Y248 185 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 PCDHB12Q9Y5F1 795 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 EVPLQ92817 2033 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 PRUNE2Q8WUY3 3088 aa6.84□□□□□ -1.31
PTPN20-208ENST00000395727 ZMYM2Q9UBW7 1377 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 TMEM238LA0A1B0GVL6 79 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 FSCN2O14926 492 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 ASAP2O43150 1006 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 NEMFO60524 1076 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 SLITRK3O94933 977 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 EYA4O95677 639 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 XRCC6P12956 609 aaKnown RBP eCLIP6.83□□□□□ -1.32
PTPN20-208ENST00000395727 ATF7P17544 494 aaPredicted RBP6.83□□□□□ -1.32
PTPN20-208ENST00000395727 MUTP22033 750 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 YWHABP31946 246 aaKnown RBP6.83□□□□□ -1.32
PTPN20-208ENST00000395727 LTBRP36941 435 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 HYAL1Q12794 435 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 DRP2Q13474 957 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 TRIM29Q14134 588 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 MTERF2Q49AM1 385 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 NXPE4Q6UWF7 544 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 OTUD6AQ7L8S5 288 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 ECHDC2Q86YB7 292 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 FAM178BQ8IXR5 827 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 EFHBQ8N7U6 833 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 NECAB1Q8N987 351 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 KLHL23Q8NBE8 558 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 COLGALT1Q8NBJ5 622 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 PSPC1Q8WXF1 523 aaKnown RBP6.83□□□□□ -1.32
PTPN20-208ENST00000395727 GJA10Q969M2 543 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 CASD1Q96PB1 797 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 MTMR9Q96QG7 549 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 UIMC1Q96RL1 719 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 CDCA3Q99618 268 aaPredicted RBP6.83□□□□□ -1.32
PTPN20-208ENST00000395727 KIF2CQ99661 725 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 HSD17B14Q9BPX1 270 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 C1QTNF1Q9BXJ1 281 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 NFKBIZQ9BYH8 718 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 FOXP1Q9H334 677 aaPredicted RBP6.83□□□□□ -1.32
PTPN20-208ENST00000395727 CWH43Q9H720 699 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 IFT122Q9HBG6 1241 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 ANKEF1Q9NU02 776 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 AGPAT5Q9NUQ2 364 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 RNF19AQ9NV58 838 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 WRAP73Q9P2S5 460 aaPredicted RBP6.83□□□□□ -1.32
PTPN20-208ENST00000395727 PCDHA12Q9UN75 941 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 COL4A3BPQ9Y5P4 624 aa6.83□□□□□ -1.32
PTPN20-208ENST00000395727 CNTNAP2Q9UHC6 1331 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 A0A087WZ62 844 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 BTBD18B2RXH4 712 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 RBAK-RBAKDNI3L0D1 243 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 GIPC1O14908 333 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 INPPL1O15357 1258 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 TBX10O75333 385 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 FGF18O76093 207 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 ESRRAP11474 423 aaPredicted RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 KCNA5P22460 613 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 DNAJB1P25685 340 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 CDC25BP30305 580 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms