RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 LCORLQ8N3X6 602 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 EEF2KMTQ96G04 330 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 PHF8Q9UPP1 1060 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 OR6B2Q6IFH4 312 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 C3orf20Q8ND61 904 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 PHACTR1Q9C0D0 580 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 NDST4Q9H3R1 872 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 SLC25A13Q9UJS0 675 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 INSRP06213 1382 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 CCDC182A6NF36 153 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 LDHAP00338 332 aaKnown RBP14.04□□□□□ -0.16
USP49-203ENST00000394253 RAD51Q06609 339 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 ATP1A4Q13733 1029 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 DPCR1Q3MIW9 517 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 DGKHQ86XP1 1220 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 SVOPQ8N4V2 548 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 BTBD3Q9Y2F9 522 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 SRPRBQ9Y5M8 271 aaKnown RBP14.04□□□□□ -0.16
USP49-203ENST00000394253 ANXA1P04083 346 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 NSL1Q96IY1 281 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 CCDC162PA2VCL2 907 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 MFAP3LO75121 409 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 ACADLP28330 430 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 RXRGP48443 463 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 BNC1Q01954 994 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 STX5Q13190 355 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 LPCAT2Q7L5N7 544 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 ZCCHC7Q8N3Z6 543 aaKnown RBP14.04□□□□□ -0.16
USP49-203ENST00000394253 FANCBQ8NB91 859 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 SEC16BQ96JE7 1060 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 TRAPPC9Q96Q05 1148 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 DDX50Q9BQ39 737 aaKnown RBP14.04□□□□□ -0.16
USP49-203ENST00000394253 KRT34O76011 436 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 SLC39A14Q15043 492 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 PNMA1Q8ND90 353 aa14.04□□□□□ -0.16
USP49-203ENST00000394253 OSBPP22059 807 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 ATP13A5Q4VNC0 1218 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 DCLRE1BQ9H816 532 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 HDAC6Q9UBN7 1215 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 hCG_1642624A0A1W2PR95 340 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 TEX46H3BTG2 121 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 BNIP3LO60238 219 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 RGS2P41220 211 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 QARSP47897 775 aaKnown RBP14.03□□□□□ -0.16
USP49-203ENST00000394253 GYS2P54840 703 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 SYTL3Q4VX76 610 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 ZNF467Q7Z7K2 595 aaPredicted RBP14.03□□□□□ -0.16
USP49-203ENST00000394253 PCDHA1Q9Y5I3 950 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 E9PBE3 544 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 PSMD3O43242 534 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 LSP1P33241 339 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 SERPINB9P50453 376 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 POLA2Q14181 598 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 H3BMM5 538 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 APOL1O14791 398 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 PRIM2P49643 509 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 CNTN1Q12860 1018 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 RESTQ13127 1097 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 VPS33AQ96AX1 596 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 MIEF2Q96C03 454 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 SLITRK2Q9H156 845 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 LINC00854A0A1B0GVQ3 168 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 F8VZ95 297 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 C21orf59P57076 290 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 GTF2H3Q13889 308 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 DGKKQ5KSL6 1271 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 AFF4Q9UHB7 1163 aaKnown RBP14.03□□□□□ -0.16
USP49-203ENST00000394253 MYL12AP19105 171 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 FNTAP49354 379 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 EXOSC10Q01780 885 aaKnown RBP14.03□□□□□ -0.16
USP49-203ENST00000394253 CBFBQ13951 182 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 DGUOKQ16854 277 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 TIMM50Q3ZCQ8 353 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 BNIPLQ7Z465 357 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 TGFBRAP1Q8WUH2 860 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 ZNF624Q9P2J8 865 aaPredicted RBP14.03□□□□□ -0.16
USP49-203ENST00000394253 TTC7AQ9ULT0 858 aaPredicted RBP14.03□□□□□ -0.16
USP49-203ENST00000394253 ING4Q9UNL4 249 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 ZBTB1Q9Y2K1 713 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 PPIP5K1Q6PFW1 1433 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
USP49-203ENST00000394253 A0A0X1KG70 313 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 FAM92AA1XBS5 289 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 CCT8L1PA6NM43 557 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 ECE2O60344 883 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 SNX4O95219 450 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 CCND2P30279 289 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 RGS4P49798 205 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 KYNUQ16719 465 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 GSTA3Q16772 222 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 CACTIN-AS1Q8N1I8 211 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 ZNF473Q8WTR7 871 aaKnown RBP14.03□□□□□ -0.16
USP49-203ENST00000394253 KIAA1586Q9HCI6 787 aa14.03□□□□□ -0.16
USP49-203ENST00000394253 NPEPPSP55786 919 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 ZNF57Q68EA5 555 aaPredicted RBP14.02□□□□□ -0.16
USP49-203ENST00000394253 ERP27Q96DN0 273 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 VPS9D1Q9Y2B5 631 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 WWP2O00308 870 aa14.02□□□□□ -0.16
USP49-203ENST00000394253 EIF2S3LQ2VIR3 472 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms