RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TRIM9Q9C026 710 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 TNMDQ9H2S6 317 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 GOLPH3LQ9H4A5 285 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 KCNK12Q9HB15 430 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 SERTAD1Q9UHV2 236 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 FRMD3A2A2Y4 597 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 TISP43B9A030 160 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 PTGESO14684 152 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 MEFVO15553 781 aaPredicted RBP16.56■□□□□ 0.24
SS18L1-202ENST00000370848 ACTN4O43707 911 aaKnown RBP16.56■□□□□ 0.24
SS18L1-202ENST00000370848 POU2F2P09086 479 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 MYBP10242 640 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 NPR3P17342 541 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 CMA1P23946 247 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 AFMP43652 599 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 CASP5P51878 434 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 TUSC3Q13454 348 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 MPZL3Q6UWV2 235 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 GLIS3Q8NEA6 775 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 RABGGTAQ92696 567 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 KCNN1Q92952 543 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 BICD1Q96G01 975 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 TCHPQ9BT92 498 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 SCAND2PQ9GZW5 306 aaPredicted RBP16.56■□□□□ 0.24
SS18L1-202ENST00000370848 BLZF1Q9H2G9 400 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 CUEDC2Q9H467 287 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 PANK4Q9NVE7 773 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 KCNG1Q9UIX4 513 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 HPSEQ9Y251 543 aa16.56■□□□□ 0.24
SS18L1-202ENST00000370848 VWA8A3KMH1 1905 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 SF3B1O75533 1304 aaKnown RBP eCLIP16.55■□□□□ 0.244e-6■■■■■ 139.6
SS18L1-202ENST00000370848 CCDC195A0A1B0GUA6 201 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 H0YCG3 227 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 TMEM189-UBE2V1I3L0A0 370 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 C2CD2LO14523 706 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 TGM5O43548 720 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 TOM1L1O75674 476 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 PPP1R37O75864 691 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 MCF2P10911 925 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 AOC1P19801 751 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 ANP32AP39687 249 aaKnown RBP16.55■□□□□ 0.24
SS18L1-202ENST00000370848 GRM5P41594 1212 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 ASIC1P78348 528 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 GTF2BQ00403 316 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 KCNA1Q09470 495 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
SS18L1-202ENST00000370848 GLRA4Q5JXX5 417 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 ZNF720Q7Z2F6 126 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 MAP4K3Q8IVH8 894 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 FSIP1Q8NA03 581 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 PIK3R5Q8WYR1 880 aa16.55■□□□□ 0.24
SS18L1-202ENST00000370848 MRPL44Q9H9J2 332 aaKnown RBP16.55■□□□□ 0.24
SS18L1-202ENST00000370848 ANKRD63C9JTQ0 380 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 HNRNPDLO14979 420 aaKnown RBP16.54■□□□□ 0.24
SS18L1-202ENST00000370848 RFPL2O75678 378 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 PIGRP01833 764 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 GAP43P17677 238 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 HOXA9P31269 272 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 LIG4P49917 911 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 NDUFA8P51970 172 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 MCL1Q07820 350 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 CUL4BQ13620 913 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 NOLC1Q14978 699 aaKnown RBP eCLIP16.54■□□□□ 0.24
SS18L1-202ENST00000370848 ZBTB41Q5SVQ8 909 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 ZPBP2Q6X784 338 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 C7orf25Q9BPX7 421 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 PAAF1Q9BRP4 392 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 STRA6Q9BX79 667 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 PRKD2Q9BZL6 878 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 ST6GALNAC4Q9H4F1 302 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.54■□□□□ 0.246e-8■□□□□ 11
SS18L1-202ENST00000370848 SEL1LQ9UBV2 794 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 WNT16Q9UBV4 365 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 FBXW11Q9UKB1 542 aa16.54■□□□□ 0.24
SS18L1-202ENST00000370848 MYH11P35749 1972 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 ZNF292O60281 2723 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 ANHXE9PGG2 379 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 ZMYND10O75800 440 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 GCNT3O95395 438 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 TNFSF9P41273 254 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 MATR3P43243 847 aaKnown RBP eCLIP16.53■□□□□ 0.24
SS18L1-202ENST00000370848 RTP2Q5QGT7 225 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 CCDC65Q8IXS2 484 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 TMEM130Q8N3G9 435 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 SMG7Q92540 1137 aaKnown RBP16.53■□□□□ 0.24
SS18L1-202ENST00000370848 MAGEF1Q9HAY2 307 aa16.53■□□□□ 0.24
SS18L1-202ENST00000370848 ZFP37Q9Y6Q3 630 aaPredicted RBP16.53■□□□□ 0.24
SS18L1-202ENST00000370848 FAM237AA0A1B0GTK4 181 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 A0A1W2PQ27 194 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 A0A1W2PQ64 194 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 A0A1W2PQD8 194 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 CASTOR2A6NHX0 329 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 H0Y858 1186 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 CLDN3O15551 220 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 KIF4AO95239 1232 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 SLFN14P0C7P3 912 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 IGFBP6P24592 240 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-202ENST00000370848 ELAVL2Q12926 359 aaKnown RBP16.52■□□□□ 0.24
SS18L1-202ENST00000370848 PDXDC1Q6P996 788 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 RTL10Q7L3V2 364 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms