RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 SLC39A2Q9NP94 309 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 TBCCD1Q9NVR7 557 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 PCDHGA3Q9Y5H0 932 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 BCL10O95999 233 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 SNAP25P60880 206 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 SNAPC2Q13487 334 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 DARS2Q6PI48 645 aaKnown RBP10.59□□□□□ -0.71
SIM1-202ENST00000369208 IFT43Q96FT9 208 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 SRPK1Q96SB4 655 aaKnown RBP10.59□□□□□ -0.71
SIM1-202ENST00000369208 PPARGC1AQ9UBK2 798 aaKnown RBP10.59□□□□□ -0.71
SIM1-202ENST00000369208 TCP11X1B4DZS4 312 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 ZMYND10O75800 440 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 KLHL2O95198 593 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 UBTFL6P0CB48 400 aaPredicted RBP10.59□□□□□ -0.71
SIM1-202ENST00000369208 CDH2P19022 906 aaPredicted RBP10.59□□□□□ -0.71
SIM1-202ENST00000369208 TMED2Q15363 201 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 DQX1Q8TE96 717 aaKnown RBP10.59□□□□□ -0.71
SIM1-202ENST00000369208 WDR12Q9GZL7 423 aaKnown RBP10.59□□□□□ -0.71
SIM1-202ENST00000369208 DPH5Q9H2P9 285 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 ACAD9Q9H845 621 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 TRIM24O15164 1050 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 CLDN3O15551 220 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 ZBED1O96006 694 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 HDLBPQ00341 1268 aaKnown RBP10.59□□□□□ -0.71
SIM1-202ENST00000369208 RBL2Q08999 1139 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 OSBPL8Q9BZF1 889 aa10.59□□□□□ -0.71
SIM1-202ENST00000369208 GAS2O43903 313 aaKnown RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 TBC1D4O60343 1298 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 SLC4A1P02730 911 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 PFKFB1P16118 471 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 ST8SIA6P61647 398 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 PNOCQ13519 176 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 MEI1Q5TIA1 1274 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 SNRNP48Q6IEG0 339 aaKnown RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 TRIM54Q9BYV2 358 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 AIPL1Q9NZN9 384 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 INPP5FQ9Y2H2 1132 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 RASA4BC9J798 803 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 RASA4O43374 803 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 KRT1P04264 644 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 CYP2E1P05181 493 aaPredicted RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 CCNCP24863 283 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 VSNL1P62760 191 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 LRRC8EQ6NSJ5 796 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 C11orf74Q86VG3 221 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 MCUQ8NE86 351 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 TUBGCP5Q96RT8 1024 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 KCNF1Q9H3M0 494 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 ERBB3P21860 1342 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 RNF103-CHMP3A0A140T963 221 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 USP17L15C9J2P7 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 USP17L13C9JLJ4 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 USP17L11C9JVI0 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 USP17L18D6R9N7 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 USP17L22D6RA61 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 USP17L17D6RBQ6 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 USP17L19D6RCP7 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 USP17L20D6RJB6 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 PARNO95453 639 aaKnown RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 MT-ND3P03897 115 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 AP3M2P53677 418 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 USP17L24Q0WX57 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 FAPQ12884 760 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 SNX17Q15036 470 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 RWDD4Q6NW29 188 aaKnown RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 CCNI2Q6ZMN8 369 aaPredicted RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 STAG2Q8N3U4 1231 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 SYMPKQ92797 1274 aaKnown RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 ZMYM1Q5SVZ6 1142 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 NMD3Q96D46 503 aaKnown RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 FOXP3Q9BZS1 431 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 KIF17Q9P2E2 1029 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 CPA1P15085 419 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 CASP2P42575 452 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 ARL4DP49703 201 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 XIAPP98170 497 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 RABGAP1LQ5R372 815 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 ACAD11Q709F0 780 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 FSD1LQ9BXM9 530 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 SYNPO2Q9UMS6 1093 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 SOWAHDA6NJG2 315 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 BNIP3LO60238 219 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 EIF2AK2P19525 551 aaKnown RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 PURAQ00577 322 aaKnown RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 EHHADHQ08426 723 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 TBCKQ8TEA7 893 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 EME1Q96AY2 570 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 PLEKHG4BQ96PX9 1271 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 TBXAS1P24557 533 aaPredicted RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 ADD2P35612 726 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 KLHL38Q2WGJ6 581 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 TAF1BQ53T94 588 aaPredicted RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 RSBN1Q5VWQ0 802 aaPredicted RBP10.58□□□□□ -0.72
SIM1-202ENST00000369208 TRIM69Q86WT6 500 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 ZNF302Q9NR11 478 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 COPG2Q9UBF2 871 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 RWDD2AQ9UIY3 292 aa10.58□□□□□ -0.72
SIM1-202ENST00000369208 ATP9AO75110 1047 aa10.57□□□□□ -0.72
SIM1-202ENST00000369208 SF3A3Q12874 501 aaKnown RBP eCLIP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms