RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 CCDC77Q9BR77 488 aa20.89■□□□□ 0.93
TRIM58-201ENST00000366481 COL20A1Q9P218 1284 aa20.89■□□□□ 0.93
TRIM58-201ENST00000366481 TTC7AQ9ULT0 858 aaPredicted RBP20.89■□□□□ 0.93
TRIM58-201ENST00000366481 TAF1LQ8IZX4 1826 aa20.89■□□□□ 0.93
TRIM58-201ENST00000366481 NVLO15381 856 aaKnown RBP20.89■□□□□ 0.93
TRIM58-201ENST00000366481 PEX11AO75192 247 aa20.89■□□□□ 0.93
TRIM58-201ENST00000366481 DRG2P55039 364 aaKnown RBP20.89■□□□□ 0.93
TRIM58-201ENST00000366481 LDHDQ86WU2 507 aa20.89■□□□□ 0.93
TRIM58-201ENST00000366481 C9orf72Q96LT7 481 aa20.89■□□□□ 0.93
TRIM58-201ENST00000366481 SLCO1B3Q9NPD5 702 aa20.89■□□□□ 0.93
TRIM58-201ENST00000366481 PYGMP11217 842 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 VCAM1P19320 739 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 COILP38432 576 aaPredicted RBP20.88■□□□□ 0.93
TRIM58-201ENST00000366481 RASSF2P50749 326 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 PEX3P56589 373 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 PPATQ06203 517 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 HP1BP3Q5SSJ5 553 aaPredicted RBP20.88■□□□□ 0.93
TRIM58-201ENST00000366481 RASIP1Q5U651 963 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 RFX8Q6ZV50 586 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 MIER3Q7Z3K6 550 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 SERPINB12Q96P63 405 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 GBP5Q96PP8 586 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 KRT15P19012 456 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 KRT17Q04695 432 aa20.88■□□□□ 0.93
TRIM58-201ENST00000366481 YDJCA8MPS7 323 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 POC1B-GALNT4F8VUJ3 575 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 H0YIN7 160 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 MYCLP12524 364 aaPredicted RBP20.87■□□□□ 0.93
TRIM58-201ENST00000366481 CHKAP35790 457 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 CLUL1Q15846 466 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 SEPT7Q16181 437 aaKnown RBP20.87■□□□□ 0.93
TRIM58-201ENST00000366481 TRMT10CQ7L0Y3 403 aaKnown RBP20.87■□□□□ 0.93
TRIM58-201ENST00000366481 CYP4X1Q8N118 509 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 RTN3O95197 1032 aaPredicted RBP20.87■□□□□ 0.93
TRIM58-201ENST00000366481 HSPA6P17066 643 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 EIF2AK2P19525 551 aaKnown RBP20.87■□□□□ 0.93
TRIM58-201ENST00000366481 SGO2Q562F6 1265 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 RNF207Q6ZRF8 634 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 CBWD2Q8IUF1 395 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 B4GALNT2Q8NHY0 566 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 SLC5A5Q92911 643 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 TEKT3Q9BXF9 490 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 TUFT1Q9NNX1 390 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 KCNH7Q9NS40 1196 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 LRRC42Q9Y546 428 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 A0A1B0GVG6 124 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 WDR91A4D1P6 747 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 ANKRD62A6NC57 917 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 MTFR1Q15390 333 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 ZRSR2Q15696 482 aaKnown RBP20.87■□□□□ 0.93
TRIM58-201ENST00000366481 PDCD2Q16342 344 aaPredicted RBP20.87■□□□□ 0.93
TRIM58-201ENST00000366481 LMBRD2Q68DH5 695 aaPredicted RBP20.87■□□□□ 0.93
TRIM58-201ENST00000366481 MAGEB18Q96M61 343 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 PI4K2AQ9BTU6 479 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 DCTN4Q9UJW0 460 aa20.87■□□□□ 0.93
TRIM58-201ENST00000366481 EIF3DO15371 548 aaKnown RBP eCLIP20.86■□□□□ 0.93
TRIM58-201ENST00000366481 SP100P23497 879 aaPredicted RBP20.86■□□□□ 0.93
TRIM58-201ENST00000366481 CNGA1P29973 690 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 VAMP7P51809 220 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 PPP1R21Q6ZMI0 780 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 PHTF1Q9UMS5 762 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 FRMPD4Q14CM0 1322 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 CLDN3O15551 220 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 SKIP12755 728 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 ALAS1P13196 640 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 GM2AP17900 193 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 POLGP54098 1239 aaPredicted RBP20.86■□□□□ 0.93
TRIM58-201ENST00000366481 MKRN3Q13064 507 aaKnown RBP20.86■□□□□ 0.93
TRIM58-201ENST00000366481 CC2D2BQ6DHV5 1058 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 NOP9Q86U38 636 aaKnown RBP20.86■□□□□ 0.93
TRIM58-201ENST00000366481 SCYL3Q8IZE3 742 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 PPFIBP2Q8ND30 876 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 ATG4AQ8WYN0 398 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 STOML1Q9UBI4 398 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 ZHX2Q9Y6X8 837 aa20.86■□□□□ 0.93
TRIM58-201ENST00000366481 ATP5HO75947 161 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 KCNA3P22001 575 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 HOXA7P31268 230 aaPredicted RBP20.85■□□□□ 0.93
TRIM58-201ENST00000366481 FOXN2P32314 431 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 CUL3Q13618 768 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 FAM102BQ5T8I3 360 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 MFSD5Q6N075 450 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 LMO3Q8TAP4 145 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 STMN2Q93045 179 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 MCUR1Q96AQ8 359 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 ZSWIM1Q9BR11 485 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 CCPG1Q9ULG6 757 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 NAALADL1Q9UQQ1 740 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 USH1CQ9Y6N9 552 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 PPP2R5CQ13362 524 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 UGCGQ16739 394 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 SLC27A3Q5K4L6 730 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 ZFYVE27Q5T4F4 411 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 RNF43Q68DV7 783 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 PRUNE1Q86TP1 453 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 ANKRD35Q8N283 1001 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 DENND2DQ9H6A0 471 aaPredicted RBP20.85■□□□□ 0.93
TRIM58-201ENST00000366481 ANAPC5Q9UJX4 755 aa20.85■□□□□ 0.93
TRIM58-201ENST00000366481 GTPBP10A4D1E9 387 aaKnown RBP20.85■□□□□ 0.93
TRIM58-201ENST00000366481 MIF4GDA9UHW6 222 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms