RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 PARVAQ9NVD7 372 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 TOM1L1O75674 476 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 TJP3O95049 919 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 MAN1A1P33908 653 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 LIG3P49916 1009 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 CDH8P55286 799 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 KCNT1Q5JUK3 1230 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 PAPD7Q5XG87 772 aaKnown RBP13.25□□□□□ -0.29
LRRK2-202ENST00000343742 C1orf228Q6PIY5 440 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 DNERQ8NFT8 737 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 CLEC4DQ8WXI8 215 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 LENG9Q96B70 501 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 ARHGEF26Q96DR7 871 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 OSMRQ99650 979 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 LRRIQ3A6PVS8 624 aaPredicted RBP13.25□□□□□ -0.29
LRRK2-202ENST00000343742 OGTO15294 1046 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 MUTP22033 750 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 MAGOHP61326 146 aaKnown RBP13.25□□□□□ -0.29
LRRK2-202ENST00000343742 GPS1Q13098 491 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 HSDL1Q3SXM5 330 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 CEP57Q86XR8 500 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 TEX2Q8IWB9 1127 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 HOMER3Q9NSC5 361 aa13.25□□□□□ -0.29
LRRK2-202ENST00000343742 PLIN4Q96Q06 1357 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 HSD17B4P51659 736 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 CDK17Q00537 523 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 KRT17Q04695 432 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 NME3Q13232 169 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 SCN4BQ8IWT1 228 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 TMEM161BQ8NDZ6 487 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 FBXO41Q8TF61 875 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 SYT17Q9BSW7 474 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 CREB3O43889 395 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 H2AFXP16104 143 aaPredicted RBP13.24□□□□□ -0.29
LRRK2-202ENST00000343742 CDH6P55285 790 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 IFT88Q13099 833 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 DGKDQ16760 1214 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 ALS2CLQ60I27 953 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 B4GALNT4Q76KP1 1039 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 APTXQ7Z2E3 356 aaKnown RBP13.24□□□□□ -0.29
LRRK2-202ENST00000343742 CCDC33Q8N5R6 958 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 HPDLQ96IR7 371 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 EXOC1LA0A1B0GW35 172 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 USP2O75604 605 aaPredicted RBP13.24□□□□□ -0.29
LRRK2-202ENST00000343742 PPATQ06203 517 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 PAN2Q504Q3 1202 aaKnown RBP13.24□□□□□ -0.29
LRRK2-202ENST00000343742 AADACL2Q6P093 401 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 NIF3L1Q9GZT8 377 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 MROH8Q9H579 483 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 CASZ1Q86V15 1759 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 PODXLO00592 558 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 ZNF263O14978 683 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 GLI1P08151 1106 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 SDC4P31431 198 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 ARL4AP40617 200 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 GTF2A2P52657 109 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 CDR2Q01850 454 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 PLCB4Q15147 1175 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 RUNDC3BQ96NL0 473 aa13.24□□□□□ -0.29
LRRK2-202ENST00000343742 LAMB4A4D0S4 1761 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 CXCL11O14625 94 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 ZBED1O96006 694 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 KRT10P13645 584 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 PDGFRAP16234 1089 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 CYP2C19P33261 490 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 PLA2G4AP47712 749 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 LMNB2Q03252 620 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 BEND6Q5SZJ8 279 aaPredicted RBP13.23□□□□□ -0.29
LRRK2-202ENST00000343742 C9orf72Q96LT7 481 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 FUT8Q9BYC5 575 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 DHX35Q9H5Z1 703 aaKnown RBP13.23□□□□□ -0.29
LRRK2-202ENST00000343742 PRMT7Q9NVM4 692 aaPredicted RBP13.23□□□□□ -0.29
LRRK2-202ENST00000343742 IP6K2Q9UHH9 426 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 P4HA2O15460 535 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 MAGEB2O15479 319 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 NIPA1Q7RTP0 329 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 EMC1Q8N766 993 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 FBF1Q8TES7 1133 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 SYNPO2Q9UMS6 1093 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 ITGB4P16144 1822 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 GNAT1P11488 350 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 GARTP22102 1010 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 GLRA2P23416 452 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 CHRNA3P32297 505 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 LRRC14Q15048 493 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 HYIQ5T013 277 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 DAB2IPQ5VWQ8 1189 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 NOP9Q86U38 636 aaKnown RBP13.23□□□□□ -0.29
LRRK2-202ENST00000343742 ATP8B4Q8TF62 1192 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 EXOC4Q96A65 974 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 TRIM7Q9C029 511 aa13.23□□□□□ -0.29
LRRK2-202ENST00000343742 TLR2O60603 784 aa13.22□□□□□ -0.29
LRRK2-202ENST00000343742 STAG3L1P0CL83 205 aa13.22□□□□□ -0.29
LRRK2-202ENST00000343742 RALAP11233 206 aa13.22□□□□□ -0.29
LRRK2-202ENST00000343742 NUMBP49757 651 aa13.22□□□□□ -0.29
LRRK2-202ENST00000343742 PMS2P54278 862 aa13.22□□□□□ -0.29
LRRK2-202ENST00000343742 OAZ1P54368 228 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms