RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 AMPD3Q01432 767 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 TMC5Q6UXY8 1006 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 ANKS3Q6ZW76 656 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 RTL10Q7L3V2 364 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 DYMQ7RTS9 669 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 SFR1Q86XK3 245 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 CEP57Q86XR8 500 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 C12orf76Q8N812 135 aaPredicted RBP14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 IQUBQ8NA54 791 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 LNX1Q8TBB1 728 aaPredicted RBP14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 DNAJC19Q96DA6 116 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 B3GALT6Q96L58 329 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 ZMAT2Q96NC0 199 aaKnown RBP14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 PYM1Q9BRP8 204 aaKnown RBP14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 MSTO1Q9BUK6 570 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 MRPL44Q9H9J2 332 aaKnown RBP14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 BACE2Q9Y5Z0 518 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 PDCD11Q14690 1871 aaKnown RBP14.52□□□□□ -0.08
SIRPB3P-201ENST00000340424 SYN3O14994 580 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 TGM5O43548 720 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 FAM189A1O60320 539 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 PPP1R37O75864 691 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 ADRB2P07550 413 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 CXCL8P10145 99 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 PAX3P23760 479 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 NMT1P30419 496 aaKnown RBP14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 SOX4Q06945 474 aaPredicted RBP14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 POSTNQ15063 836 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 LILRA6Q6PI73 481 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 CCDC149Q6ZUS6 474 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 CCDC65Q8IXS2 484 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 TDRD5Q8NAT2 981 aaKnown RBP14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 STAMQ92783 540 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 ACSF2Q96CM8 615 aaPredicted RBP14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 STRA6Q9BX79 667 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 HAPLN2Q9GZV7 340 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 RPF1Q9H9Y2 349 aaKnown RBP14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 GOLGA2P5Q9HBQ8 144 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 TFIP11Q9UBB9 837 aaKnown RBP14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 MTRRQ9UBK8 725 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 MUTYHQ9UIF7 546 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 UBQLN1Q9UMX0 589 aaKnown RBP14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 DERAQ9Y315 318 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 NUB1Q9Y5A7 615 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 STYXL1Q9Y6J8 313 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 PLXNA3P51805 1871 aa14.52□□□□□ -0.09
SIRPB3P-201ENST00000340424 TRIOO75962 3097 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 MTCL1Q9Y4B5 1905 aaKnown RBP14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 DENND4AQ7Z401 1863 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 A0A087X0B3 334 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 LRPAP1P30533 357 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 HOXA9P31269 272 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 RAB33AQ14088 237 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 L1TD1Q5T7N2 865 aaKnown RBP14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 LIN9Q5TKA1 542 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 CNNM4Q6P4Q7 775 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 PRSS55Q6UWB4 352 aaPredicted RBP14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 CD300LGQ6UXG3 332 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 STXBP4Q6ZWJ1 553 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 OTOP3Q7RTS5 596 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 PALB2Q86YC2 1186 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZDHHC14Q8IZN3 488 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 PDILTQ8N807 584 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 KREMEN2Q8NCW0 462 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 C3orf58Q8NDZ4 430 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 EDAQ92838 391 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 ACCSQ96QU6 501 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 CLSTN3Q9BQT9 956 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 LRFN3Q9BTN0 628 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 KBTBD4Q9NVX7 518 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 FAM13BQ9NYF5 915 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 FBXW11Q9UKB1 542 aa14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 CPSF3Q9UKF6 684 aaKnown RBP14.51□□□□□ -0.09
SIRPB3P-201ENST00000340424 CCDC195A0A1B0GUA6 201 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 MEFVO15553 781 aaPredicted RBP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 POU2F2P09086 479 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 HNRNPA1P09651 372 aaKnown RBP eCLIP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 IDEP14735 1019 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 RPL17P18621 184 aaKnown RBP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 ME1P48163 572 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZBTB6Q15916 424 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 ENOX2Q16206 610 aaKnown RBP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 E2F4Q16254 413 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 PTPN21Q16825 1174 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 UVSSAQ2YD98 709 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 SEZ6Q53EL9 994 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZC2HC1CQ53FD0 456 aaPredicted RBP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 AXDND1Q5T1B0 1012 aaPredicted RBP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 FOXD4L5Q5VV16 416 aaPredicted RBP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 ADALQ6DHV7 355 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 SLC39A4Q6P5W5 647 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 APPL2Q8NEU8 664 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 FOXD4L4Q8WXT5 416 aaPredicted RBP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 C18orf25Q96B23 403 aaPredicted RBP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 SUSD3Q96L08 255 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 OXCT2Q9BYC2 517 aaPredicted RBP14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 PANK2Q9BZ23 570 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 ASB7Q9H672 318 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 TMEM206Q9H813 350 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 WDR6Q9NNW5 1121 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms