RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ANKRD35Q8N283 1001 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 LRRC8CQ8TDW0 803 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 TLE6Q9H808 572 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 SPON1Q9HCB6 807 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 STOML1Q9UBI4 398 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 LRCH1Q9Y2L9 728 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 TULP1O00294 542 aaPredicted RBP19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 MTA2O94776 668 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 IVDP26440 423 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 VHLP40337 213 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 ABCB5Q2M3G0 1257 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 PHLDB3Q6NSJ2 640 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 SLFN12Q8IYM2 578 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 DRAXINQ8NBI3 349 aaPredicted RBP19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 PHC3Q8NDX5 983 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 ERMNQ8TAM6 284 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 ZBED3Q96IU2 234 aaPredicted RBP19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 TRAPPC9Q96Q05 1148 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 MYOZ2Q9NPC6 264 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 EURLQ9NYK6 297 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 NYAP2Q9P242 653 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 RASA4BC9J798 803 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 WNT10BO00744 389 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 CLDN3O15551 220 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 ATMINO43313 823 aaPredicted RBP19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 RASA4O43374 803 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 RPS12P25398 132 aaKnown RBP19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 RPA1P27694 616 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 LAMB3Q13751 1172 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 PTK6Q13882 451 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 SGO2Q562F6 1265 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 ZNF746Q6NUN9 644 aaPredicted RBP19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 C10orf82Q8WW14 230 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 MKL1Q969V6 931 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 PWWP2AQ96N64 755 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 MKNK1Q9BUB5 465 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 SLCO1B3Q9NPD5 702 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 SCOCQ9UIL1 159 aa19.26■□□□□ 0.67
CLSTN3-202ENST00000331148 RNF8O76064 485 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 EEF2P13639 858 aaKnown RBP19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 MARK3P27448 753 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 SESN3P58005 492 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 TMED2Q15363 201 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 NFIL3Q16649 462 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 RBM26Q5T8P6 1007 aaKnown RBP19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 FOXB2Q5VYV0 432 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 RPUSD2Q8IZ73 545 aaKnown RBP19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 CFAP61Q8NHU2 1237 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 BTBD6Q96KE9 485 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 GORASP1Q9BQQ3 440 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 RGL1Q9NZL6 768 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 CNTNAP1P78357 1384 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 EDF1O60869 148 aaKnown RBP19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 GDF11O95390 407 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 PTPN4P29074 926 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 ZNF543Q08ER8 600 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 LLGL1Q15334 1064 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 SHROOM1Q2M3G4 852 aaPredicted RBP19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 SPDYAQ5MJ70 313 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 RGS9BPQ6ZS82 235 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 FAM83AQ86UY5 434 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 MBOAT7Q96N66 472 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 OLFML3Q9NRN5 406 aa19.25■□□□□ 0.67
CLSTN3-202ENST00000331148 CYP3A7-CYP3A51PA0A087WV96 503 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 A0A1W2PRG0 241 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L15C9J2P7 530 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L13C9JLJ4 530 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L11C9JVI0 530 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L18D6R9N7 530 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L22D6RA61 530 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L17D6RBQ6 530 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L19D6RCP7 530 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L20D6RJB6 530 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 GSTA2P09210 222 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 RFX1P22670 979 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 CYP3A7P24462 503 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 SSR1P43307 286 aaKnown RBP19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 CAV1Q03135 178 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L24Q0WX57 530 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 RCN2Q14257 317 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 COG2Q14746 738 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 TRIP13Q15645 432 aaPredicted RBP19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 KHDC1Q4VXA5 237 aaKnown RBP19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 TAF1BQ53T94 588 aaPredicted RBP19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 RFWD3Q6PCD5 774 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 USP17L6PQ6QN14 398 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 PRUNE1Q86TP1 453 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 ETNPPLQ8TBG4 499 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 BHMT2Q9H2M3 363 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 IRAK4Q9NWZ3 460 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 ANAPC5Q9UJX4 755 aa19.24■□□□□ 0.67
CLSTN3-202ENST00000331148 FZD9O00144 591 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 FSCN2O14926 492 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 EIF3DO15371 548 aaKnown RBP eCLIP19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 SORBS3O60504 671 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 SPAG7O75391 227 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 ATF2P15336 505 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 PRELPP51888 382 aa19.23■□□□□ 0.67
CLSTN3-202ENST00000331148 POLE2P56282 527 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms