RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 KCNE1P15382 129 aa22.43■■□□□ 1.18
RER1-201ENST00000306256 ROR1Q01973 937 aa22.43■■□□□ 1.18
RER1-201ENST00000306256 STRN3Q13033 797 aa22.43■■□□□ 1.18
RER1-201ENST00000306256 NOLC1Q14978 699 aaKnown RBP eCLIP22.43■■□□□ 1.18
RER1-201ENST00000306256 TMEM119Q4V9L6 283 aa22.43■■□□□ 1.18
RER1-201ENST00000306256 VARS2Q5ST30 1063 aaKnown RBP22.43■■□□□ 1.18
RER1-201ENST00000306256 TMEM130Q8N3G9 435 aa22.43■■□□□ 1.18
RER1-201ENST00000306256 ING5Q8WYH8 240 aa22.43■■□□□ 1.18
RER1-201ENST00000306256 NTPCRQ9BSD7 190 aaKnown RBP22.43■■□□□ 1.18
RER1-201ENST00000306256 DNMT3BQ9UBC3 853 aaKnown RBP22.43■■□□□ 1.18
RER1-201ENST00000306256 MAPTP10636 758 aaKnown RBP22.42■■□□□ 1.18
RER1-201ENST00000306256 ANGPT1Q15389 498 aa22.42■■□□□ 1.18
RER1-201ENST00000306256 UVSSAQ2YD98 709 aa22.42■■□□□ 1.18
RER1-201ENST00000306256 PABPC1LQ4VXU2 614 aaKnown RBP22.42■■□□□ 1.18
RER1-201ENST00000306256 SLC2A4RGQ9NR83 387 aa22.42■■□□□ 1.18
RER1-201ENST00000306256 NUB1Q9Y5A7 615 aa22.42■■□□□ 1.18
RER1-201ENST00000306256 PRR23AA6NEV1 266 aa22.41■■□□□ 1.18
RER1-201ENST00000306256 TOM1L1O75674 476 aa22.41■■□□□ 1.18
RER1-201ENST00000306256 POU2F2P09086 479 aa22.41■■□□□ 1.18
RER1-201ENST00000306256 SMTNP53814 917 aa22.41■■□□□ 1.18
RER1-201ENST00000306256 ARPP19P56211 112 aa22.41■■□□□ 1.18
RER1-201ENST00000306256 SLC10A6Q3KNW5 377 aa22.41■■□□□ 1.18
RER1-201ENST00000306256 NPAS3Q8IXF0 933 aa22.41■■□□□ 1.18
RER1-201ENST00000306256 FANCMQ8IYD8 2048 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 WDR27A2RRH5 827 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 RPL9P32969 192 aaKnown RBP22.4■■□□□ 1.18
RER1-201ENST00000306256 MATR3P43243 847 aaKnown RBP eCLIP22.4■■□□□ 1.18
RER1-201ENST00000306256 GPC5P78333 572 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 ARSHQ5FYA8 562 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 SPECC1Q5M775 1068 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 ARL6IP4Q66PJ3 421 aaKnown RBP22.4■■□□□ 1.18
RER1-201ENST00000306256 SLC8B1Q6J4K2 584 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 MTSS1LQ765P7 747 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 LRRC15Q8TF66 581 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 KXD1Q9BQD3 176 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 HAPLN2Q9GZV7 340 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 TUBGCP4Q9UGJ1 667 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 SMC3Q9UQE7 1217 aa22.4■■□□□ 1.18
RER1-201ENST00000306256 SYN3O14994 580 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 DCNP07585 359 aaKnown RBP22.39■■□□□ 1.17
RER1-201ENST00000306256 CXCL8P10145 99 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 MCM4P33991 863 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 SPAG1Q07617 926 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 SLC5A9Q2M3M2 681 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 ZPBP2Q6X784 338 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 ZNF461Q8TAF7 563 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 BICD1Q96G01 975 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 FOXQ1Q9C009 403 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 KCND2Q9NZV8 630 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 FBXL5Q9UKA1 691 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 KCNH3Q9ULD8 1083 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 MRPS23Q9Y3D9 190 aaKnown RBP22.39■■□□□ 1.17
RER1-201ENST00000306256 MYO15AQ9UKN7 3530 aa22.39■■□□□ 1.17
RER1-201ENST00000306256 SPTBN4Q9H254 2564 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 PRRG1O14668 218 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 CLDN3O15551 220 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 TBC1D4O60343 1298 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 ABLIM3O94929 683 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 RHOP08100 348 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 ELF1P32519 619 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 MCL1Q07820 350 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 DHX8Q14562 1220 aaKnown RBP22.38■■□□□ 1.17
RER1-201ENST00000306256 PHLDB3Q6NSJ2 640 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 GPBP1Q86WP2 473 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 KCTD17Q8N5Z5 321 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 NKD2Q969F2 451 aaPredicted RBP22.38■■□□□ 1.17
RER1-201ENST00000306256 SUSD3Q96L08 255 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 TBC1D32Q96NH3 1257 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 REEP2Q9BRK0 252 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 KCNG1Q9UIX4 513 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 CFAP54Q96N23 3096 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 VPS13AQ96RL7 3174 aa22.38■■□□□ 1.17
RER1-201ENST00000306256 ARHGEF37A1IGU5 675 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 H7C4K7 107 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 SEC24AO95486 1093 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 LRG1P02750 347 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 NCKAP1LP55160 1127 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 GRIN1Q05586 938 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 MRPL58Q14197 206 aaKnown RBP22.37■■□□□ 1.17
RER1-201ENST00000306256 CTXN3Q4LDR2 81 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 RTL10Q7L3V2 364 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 HAUS6Q7Z4H7 955 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 MCRS1Q96EZ8 462 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 UPF2Q9HAU5 1272 aaKnown RBP22.37■■□□□ 1.17
RER1-201ENST00000306256 CYP4F11Q9HBI6 524 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 LARSQ9P2J5 1176 aaKnown RBP22.37■■□□□ 1.17
RER1-201ENST00000306256 GVINP1Q7Z2Y8 2422 aa22.37■■□□□ 1.17
RER1-201ENST00000306256 EP300Q09472 2414 aaPredicted RBP22.36■■□□□ 1.17
RER1-201ENST00000306256 CEBPBP17676 345 aa22.36■■□□□ 1.17
RER1-201ENST00000306256 UBA7P41226 1012 aa22.36■■□□□ 1.17
RER1-201ENST00000306256 TNFSF9P41273 254 aa22.36■■□□□ 1.17
RER1-201ENST00000306256 SNW1Q13573 536 aaKnown RBP22.36■■□□□ 1.17
RER1-201ENST00000306256 ZBTB41Q5SVQ8 909 aa22.36■■□□□ 1.17
RER1-201ENST00000306256 LARP1BQ659C4 914 aaKnown RBP22.36■■□□□ 1.17
RER1-201ENST00000306256 ZNF280DQ6N043 979 aa22.36■■□□□ 1.17
RER1-201ENST00000306256 POTEHQ6S545 545 aa22.36■■□□□ 1.17
RER1-201ENST00000306256 AK8Q96MA6 479 aa22.36■■□□□ 1.17
RER1-201ENST00000306256 SIT1Q9Y3P8 196 aa22.36■■□□□ 1.17
RER1-201ENST00000306256 F5P12259 2224 aa22.36■■□□□ 1.17
RER1-201ENST00000306256 SCN1AP35498 2009 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms