RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 FNDC3AQ9Y2H6 1198 aaKnown RBP12.28□□□□□ -0.44
TGFA-201ENST00000295400 PCDHB2Q9Y5E7 798 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 CDH16O75309 829 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 GPC3P51654 580 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 STAT5BP51692 787 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 SLC12A2P55011 1212 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 SNX16P57768 344 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 TMC3Q7Z5M5 1100 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
TGFA-201ENST00000295400 TRIM55Q9BYV6 548 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 GANQ9H2C0 597 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 C10orf88Q9H8K7 445 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 PCDHGC5Q9Y5F6 944 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 MRC1P22897 1456 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 CACNA1FO60840 1977 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 MED7O43513 233 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 GGPS1O95749 300 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 DUOXA2Q1HG44 320 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 PHLDB3Q6NSJ2 640 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 GPAT2Q6NUI2 795 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 VCXQ9H320 206 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 ACAD9Q9H845 621 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 FAM198AQ9UFP1 575 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 GTF3C4Q9UKN8 822 aa12.28□□□□□ -0.44
TGFA-201ENST00000295400 LTN1O94822 1766 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 IGF2BP3O00425 579 aaKnown RBP eCLIP12.27□□□□□ -0.44
TGFA-201ENST00000295400 CST8O60676 142 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 CALB1P05937 261 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 ITIH2P19823 946 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 EPHB1P54762 984 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 HGSNATQ68CP4 663 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 MICALL2Q8IY33 904 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 LNX1Q8TBB1 728 aaPredicted RBP12.27□□□□□ -0.44
TGFA-201ENST00000295400 GBP5Q96PP8 586 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 KIAA1586Q9HCI6 787 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 GDF3Q9NR23 364 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 PIM2Q9P1W9 311 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 FBXO40Q9UH90 709 aa12.27□□□□□ -0.44
TGFA-201ENST00000295400 XRN1Q8IZH2 1706 aaKnown RBP12.27□□□□□ -0.45
TGFA-201ENST00000295400 APRTP07741 180 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 SPATA31C1P0DKV0 1188 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 RARAP10276 462 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 CPA2P48052 419 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 RARRES1P49788 294 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 EIF3EP60228 445 aaKnown RBP12.27□□□□□ -0.45
TGFA-201ENST00000295400 EMC2Q15006 297 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 LLGL2Q6P1M3 1020 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 IRF2BP2Q7Z5L9 587 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 UBA3Q8TBC4 463 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 RAB3IL1Q8TBN0 382 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 LRRC15Q8TF66 581 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 TTC1Q99614 292 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 YIPF3Q9GZM5 350 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 UBN1Q9NPG3 1134 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 CTNNAL1Q9UBT7 734 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 SMIM24O75264 130 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 NOL4O94818 638 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 TM4SF1P30408 202 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 RAD23BP54727 409 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 BCAR1P56945 870 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 TMEM62Q0P6H9 643 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 Q4G0T1 1027 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 CYB5D1Q6P9G0 228 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 NOP9Q86U38 636 aaKnown RBP12.27□□□□□ -0.45
TGFA-201ENST00000295400 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.27□□□□□ -0.45
TGFA-201ENST00000295400 PPP1R36Q96LQ0 422 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 WDR18Q9BV38 432 aa12.27□□□□□ -0.45
TGFA-201ENST00000295400 MOV10L1Q9BXT6 1211 aaKnown RBP12.27□□□□□ -0.45
TGFA-201ENST00000295400 LPXNO60711 386 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 CDR2Q01850 454 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 ACAD10Q6JQN1 1059 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.26□□□□□ -0.45
TGFA-201ENST00000295400 C3orf62Q6ZUJ4 267 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 CCHCR1Q8TD31 782 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 CDKL2Q92772 493 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 CCDC124Q96CT7 223 aaKnown RBP12.26□□□□□ -0.45
TGFA-201ENST00000295400 FAM163AQ96GL9 167 aaPredicted RBP12.26□□□□□ -0.45
TGFA-201ENST00000295400 KCTD10Q9H3F6 313 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 DHX35Q9H5Z1 703 aaKnown RBP12.26□□□□□ -0.45
TGFA-201ENST00000295400 CYP4F11Q9HBI6 524 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 KCNMB3Q9NPA1 279 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 OLFML3Q9NRN5 406 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 ZNRF3Q9ULT6 936 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 ARL2BPQ9Y2Y0 163 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 ASTN1O14525 1302 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 IQANK1A0A1B0GTG1 560 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 CREB3O43889 395 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 ADORA2BP29275 332 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 CAP2P40123 477 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 NFX1Q12986 1120 aaKnown RBP12.26□□□□□ -0.45
TGFA-201ENST00000295400 SUPT20HL1Q3ZLR7 823 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 XKR3Q5GH77 459 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 EMC1Q8N766 993 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 GBP7Q8N8V2 638 aaPredicted RBP12.26□□□□□ -0.45
TGFA-201ENST00000295400 NUDCD1Q96RS6 583 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 VPS11Q9H270 941 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 HOXC10Q9NYD6 342 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 NUB1Q9Y5A7 615 aa12.26□□□□□ -0.45
TGFA-201ENST00000295400 DCCP43146 1447 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 346.8 ms