RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 RTN2O75298 545 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 MAFO75444 373 aaPredicted RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 FTLP02792 175 aaPredicted RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 C4BPAP04003 597 aaKnown RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 COL6A1P12109 1028 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 CYP11B1P15538 503 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 EPHB4P54760 987 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 GJA9P57773 515 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 POU5F1Q01860 360 aaKnown RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 NEDD9Q14511 834 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 PTPROQ16827 1216 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 RHOT2Q8IXI1 618 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 PPM1KQ8N3J5 372 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 CCDC113Q9H0I3 377 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 PPME1Q9Y570 386 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 CNTNAP2Q9UHC6 1331 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 IGKV6-21A0A0C4DH24 114 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 ZNF233A6NK53 670 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 CEP104O60308 925 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 HEXIM1O94992 359 aaKnown RBP18.96■□□□□ 0.63
SSB-201ENST00000260956 VNN1O95497 513 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 GGPS1O95749 300 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 CYP1A2P05177 515 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 C6orf222P0C671 652 aaPredicted RBP18.96■□□□□ 0.63
SSB-201ENST00000260956 ECHS1P30084 290 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 TNNC1P63316 161 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 CDR2Q01850 454 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 MKRN4PQ13434 485 aaPredicted RBP18.96■□□□□ 0.63
SSB-201ENST00000260956 DRP2Q13474 957 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 EIF1ADQ8N9N8 165 aaKnown RBP18.96■□□□□ 0.63
SSB-201ENST00000260956 CASKIN2Q8WXE0 1202 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 DHX38Q92620 1227 aaKnown RBP18.96■□□□□ 0.63
SSB-201ENST00000260956 HINFPQ9BQA5 517 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 PRDM4Q9UKN5 801 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 AMFRQ9UKV5 643 aa18.96■□□□□ 0.63
SSB-201ENST00000260956 MMEP08473 750 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 TNNT3P45378 269 aaPredicted RBP18.95■□□□□ 0.62
SSB-201ENST00000260956 CARSP49589 748 aaKnown RBP18.95■□□□□ 0.62
SSB-201ENST00000260956 LIG4P49917 911 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 NKX3-2P78367 333 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 ARHGAP1Q07960 439 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 TTLL4Q14679 1199 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 KCNA10Q16322 511 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 ZBTB41Q5SVQ8 909 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 TDRD10Q5VZ19 366 aaKnown RBP18.95■□□□□ 0.62
SSB-201ENST00000260956 CDCA2Q69YH5 1023 aaPredicted RBP18.95■□□□□ 0.62
SSB-201ENST00000260956 ENOSF1Q7L5Y1 443 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 USP37Q86T82 979 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 TSEN2Q8NCE0 465 aaKnown RBP18.95■□□□□ 0.62
SSB-201ENST00000260956 ALG3Q92685 438 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 CD101Q93033 1021 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 ZBTB45Q96K62 511 aaPredicted RBP18.95■□□□□ 0.62
SSB-201ENST00000260956 CARD9Q9H257 536 aa18.95■□□□□ 0.62
SSB-201ENST00000260956 DNM1LO00429 736 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 ABLIM1O14639 778 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 TCF7P36402 384 aaPredicted RBP18.94■□□□□ 0.62
SSB-201ENST00000260956 GNASQ5JWF2 1037 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 SND1Q7KZF4 910 aaKnown RBP eCLIP18.94■□□□□ 0.62
SSB-201ENST00000260956 MREGQ8N565 214 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 ANKLE1Q8NAG6 615 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 SLC7A3Q8WY07 619 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 SEPT1Q8WYJ6 367 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 SEC14L1Q92503 715 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 ELMO3Q96BJ8 720 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 BICD1Q96G01 975 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 GDAP1L1Q96MZ0 367 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 GPR20Q99678 358 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 SH3GL2Q99962 352 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.94■□□□□ 0.625e-6■□□□□ 9.9
SSB-201ENST00000260956 PSD3Q9NYI0 1048 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 AGO2Q9UKV8 859 aaKnown RBP18.94■□□□□ 0.62
SSB-201ENST00000260956 FAN1Q9Y2M0 1017 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 LAMA2P24043 3122 aaKnown RBP18.94■□□□□ 0.62
SSB-201ENST00000260956 ANK1P16157 1881 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 CCDC188H7C350 402 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 DLATP10515 647 aaKnown RBP18.94■□□□□ 0.62
SSB-201ENST00000260956 ITGA4P13612 1032 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 ACO1P21399 889 aaKnown RBP18.94■□□□□ 0.62
SSB-201ENST00000260956 STAT5BP51692 787 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 RNASE9P60153 205 aaKnown RBP18.94■□□□□ 0.62
SSB-201ENST00000260956 GPC5P78333 572 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 GPS2Q13227 327 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 FAM160B1Q5W0V3 765 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 IFT20Q8IY31 132 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 ARRDC4Q8NCT1 418 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 PI4K2AQ9BTU6 479 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 TARS2Q9BW92 718 aaKnown RBP18.94■□□□□ 0.62
SSB-201ENST00000260956 ACBD3Q9H3P7 528 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 PCDH10Q9P2E7 1040 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 GTF3C4Q9UKN8 822 aa18.94■□□□□ 0.62
SSB-201ENST00000260956 TTLL13PA6NNM8 815 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 HLA-DRAP01903 254 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 CST5P28325 142 aaPredicted RBP18.93■□□□□ 0.62
SSB-201ENST00000260956 GYS2P54840 703 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 TRADDQ15628 312 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 FSCN1Q16658 493 aaKnown RBP18.93■□□□□ 0.62
SSB-201ENST00000260956 CELF3Q5SZQ8 465 aaKnown RBP18.93■□□□□ 0.62
SSB-201ENST00000260956 TAF3Q5VWG9 929 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 RNF180Q86T96 592 aa18.93■□□□□ 0.62
SSB-201ENST00000260956 DEPTORQ8TB45 409 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms