RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 NR1H3Q13133 447 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 C1orf146Q5VVC0 180 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 SLFN11Q7Z7L1 901 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 CPXCR1Q8N123 301 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 CRAMP1Q96RY5 1269 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 ANGPTL2Q9UKU9 493 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 ZWINTO95229 277 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 BASP1P80723 227 aaKnown RBP16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 AP3B2Q13367 1082 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 XKR9Q5GH70 373 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 SYCP2LQ5T4T6 812 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 SLC47A2Q86VL8 602 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 MORC4Q8TE76 937 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 IMPG2Q9BZV3 1241 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 SMNDC1O75940 238 aaKnown RBP eCLIP16.84■□□□□ 0.292e-9■□□□□ 10.9
SLC6A8-201ENST00000253122 LAMB3Q13751 1172 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 TLDC1Q6P9B6 456 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 L3MBTL3Q96JM7 780 aaPredicted RBP16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 TEKT3Q9BXF9 490 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 WHRNQ9P202 907 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 PCYOX1Q9UHG3 505 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 MYH7BA7E2Y1 1941 aa16.83■□□□□ 0.29
SLC6A8-201ENST00000253122 SLC16A4O15374 487 aa16.83■□□□□ 0.29
SLC6A8-201ENST00000253122 ENO1P06733 434 aaKnown RBP16.83■□□□□ 0.29
SLC6A8-201ENST00000253122 PADI6Q6TGC4 694 aa16.83■□□□□ 0.29
SLC6A8-201ENST00000253122 CPNE8Q86YQ8 564 aa16.83■□□□□ 0.29
SLC6A8-201ENST00000253122 FAM13CQ8NE31 585 aa16.83■□□□□ 0.29
SLC6A8-201ENST00000253122 ANKFY1Q9P2R3 1169 aa16.83■□□□□ 0.29
SLC6A8-201ENST00000253122 EXOC7Q9UPT5 735 aa16.83■□□□□ 0.29
SLC6A8-201ENST00000253122 LY75O60449 1722 aa16.83■□□□□ 0.29
SLC6A8-201ENST00000253122 BAZ2AQ9UIF9 1905 aaKnown RBP16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 MYCLP12524 364 aaPredicted RBP16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 NPR1P16066 1061 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 BAG6P46379 1132 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 MARSP56192 900 aaKnown RBP16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 CCDC110Q8TBZ0 833 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 VTI1AQ96AJ9 217 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 NKX1-2Q9UD57 310 aaPredicted RBP16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 STXBP5LQ9Y2K9 1186 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 POLR2MP0CAP2 368 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 CACNA2D1P54289 1103 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 RNF220Q5VTB9 566 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 ARHGEF19Q8IW93 802 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 OGFOD1Q8N543 542 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 TMEM206Q9H813 350 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 MARCOQ9UEW3 520 aaPredicted RBP16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 ASTN1O14525 1302 aa16.83■□□□□ 0.28
SLC6A8-201ENST00000253122 GTPBP10A4D1E9 387 aaKnown RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 ZBED4O75132 1171 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 SLURP2P0DP57 97 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 EPHB1P54762 984 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 EN1Q05925 392 aaPredicted RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 PKN2Q16513 984 aaKnown RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 RBBP8NLQ8NC74 664 aaPredicted RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 TBC1D16Q8TBP0 767 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 ABTB1Q969K4 478 aaPredicted RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 DDX50Q9BQ39 737 aaKnown RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 TUBB6Q9BUF5 446 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 OSBPL8Q9BZF1 889 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 SMG5Q9UPR3 1016 aaKnown RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 LAMB2P55268 1798 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 CCDC195A0A1B0GUA6 201 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 B2RBV5 119 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 MSH4O15457 936 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 CALCAP01258 141 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 PECAM1P16284 738 aaPredicted RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 PPP4CP60510 307 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 TRAF1Q13077 416 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 CEP120Q8N960 986 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 SCG3Q8WXD2 468 aaKnown RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 ART4Q93070 314 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 CCDC124Q96CT7 223 aaKnown RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 ARHGEF3Q9NR81 526 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 UVRAGQ9P2Y5 699 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 ZMYND8Q9ULU4 1186 aaPredicted RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 PCDHB4Q9Y5E5 795 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 HNRNPDLO14979 420 aaKnown RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 CREB3O43889 395 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 DAB2IPQ5VWQ8 1189 aa16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 LMBRD2Q68DH5 695 aaPredicted RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 SDCCAG8Q86SQ7 713 aaPredicted RBP16.82■□□□□ 0.28
SLC6A8-201ENST00000253122 TISP43B9A030 160 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 H0YIN7 160 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 YY1P25490 414 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 PTPN4P29074 926 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 TMPRSS15P98073 1019 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 C11orf63Q6NUN7 778 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 PI4K2AQ9BTU6 479 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 THTPAQ9BU02 230 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 MKNK1Q9BUB5 465 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 TSSK1BQ9BXA7 367 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 NDE1Q9NXR1 346 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 TMOD2Q9NZR1 351 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 SRCAPQ6ZRS2 3230 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 SPDYE5A6NIY4 337 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 GRAMD1BQ3KR37 738 aa16.81■□□□□ 0.28
SLC6A8-201ENST00000253122 CRY2Q49AN0 593 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms