RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 LLGL2Q6P1M3 1020 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 GPRASP2Q96D09 838 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 ELAC2Q9BQ52 826 aaKnown RBP17.35■□□□□ 0.37
LTBR-201ENST00000228918 PDLIM7Q9NR12 457 aa17.35■□□□□ 0.37
LTBR-201ENST00000228918 SCAF8Q9UPN6 1271 aaKnown RBP17.35■□□□□ 0.37
LTBR-201ENST00000228918 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.35■□□□□ 0.37
LTBR-201ENST00000228918 UMODL1Q5DID0 1318 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 TTC4O95801 387 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 CAV1Q03135 178 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 KLF1Q13351 362 aaPredicted RBP17.34■□□□□ 0.37
LTBR-201ENST00000228918 XRRA1Q6P2D8 792 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 MON1BQ7L1V2 547 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 MCPH1Q8NEM0 835 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 ARHGEF2Q92974 986 aaKnown RBP17.34■□□□□ 0.37
LTBR-201ENST00000228918 ATP6V0A1Q93050 837 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 BICD1Q96G01 975 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 TACO1Q9BSH4 297 aaKnown RBP17.34■□□□□ 0.37
LTBR-201ENST00000228918 CD248Q9HCU0 757 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 ARHGAP28Q9P2N2 729 aa17.34■□□□□ 0.37
LTBR-201ENST00000228918 R3HDM2Q9Y2K5 976 aaKnown RBP17.34■□□□□ 0.37
LTBR-201ENST00000228918 CTDP1Q9Y5B0 961 aaPredicted RBP17.34■□□□□ 0.37
LTBR-201ENST00000228918 TNS1Q9HBL0 1735 aaKnown RBP17.34■□□□□ 0.37
LTBR-201ENST00000228918 SORBS3O60504 671 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 ZBED4O75132 1171 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 DGAT1O75907 488 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 PROSCO94903 275 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 GSTA1P08263 222 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 ATF2P15336 505 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 CCND2P30279 289 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 NSFP46459 744 aaKnown RBP17.33■□□□□ 0.37
LTBR-201ENST00000228918 CLDN10P78369 228 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 TRIP13Q15645 432 aaPredicted RBP17.33■□□□□ 0.37
LTBR-201ENST00000228918 VSTM1Q6UX27 236 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 PHLDB2Q86SQ0 1253 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 VSIG10LQ86VR7 867 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 PARP9Q8IXQ6 854 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 TTLL6Q8N841 843 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 TRAIPQ9BWF2 469 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.33■□□□□ 0.371e-10■□□□□ 9.7
LTBR-201ENST00000228918 SLC12A4Q9UP95 1085 aa17.33■□□□□ 0.37
LTBR-201ENST00000228918 TMEM120BA0PK00 339 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 CLGNO14967 610 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 KCNA2P16389 499 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 ATP5DP30049 168 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 BPIFB4P59827 614 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 BAATQ14032 418 aaPredicted RBP17.33■□□□□ 0.36
LTBR-201ENST00000228918 ZACNQ401N2 412 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 C2CD6Q53TS8 623 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 LMBRD2Q68DH5 695 aaPredicted RBP17.33■□□□□ 0.36
LTBR-201ENST00000228918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.36
LTBR-201ENST00000228918 ATL2Q8NHH9 583 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 RPAP3Q9H6T3 665 aaPredicted RBP17.33■□□□□ 0.36
LTBR-201ENST00000228918 RNF146Q9NTX7 359 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 NEU2Q9Y3R4 380 aa17.33■□□□□ 0.36
LTBR-201ENST00000228918 COL11A1P12107 1806 aaPredicted RBP17.33■□□□□ 0.36
LTBR-201ENST00000228918 EXTL3O43909 919 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
LTBR-201ENST00000228918 OAS1P00973 400 aaKnown RBP17.32■□□□□ 0.36
LTBR-201ENST00000228918 HLA-DRAP01903 254 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 CREB1P16220 341 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 SF3A3Q12874 501 aaKnown RBP eCLIP17.32■□□□□ 0.36
LTBR-201ENST00000228918 MTMR2Q13614 643 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 PSMD6Q15008 389 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 SNCBQ16143 134 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 DAB2IPQ5VWQ8 1189 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 ZKSCAN4Q969J2 545 aaPredicted RBP17.32■□□□□ 0.36
LTBR-201ENST00000228918 TEPSINQ96N21 525 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 DNAJC17Q9NVM6 304 aaKnown RBP17.32■□□□□ 0.36
LTBR-201ENST00000228918 NINJ2Q9NZG7 142 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 CTNNAL1Q9UBT7 734 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 ZNRF3Q9ULT6 936 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 O00370 1275 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 PSTPIP1O43586 416 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 TCEA3O75764 348 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 NR3C2P08235 984 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 RALAP11233 206 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 WNT7BP56706 349 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 LRRC14Q15048 493 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 KYNUQ16719 465 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 WDR44Q5JSH3 913 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 TDRD10Q5VZ19 366 aaKnown RBP17.32■□□□□ 0.36
LTBR-201ENST00000228918 TRPM8Q7Z2W7 1104 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 WNK4Q96J92 1243 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 POLR3FQ9H1D9 316 aaPredicted RBP17.32■□□□□ 0.36
LTBR-201ENST00000228918 ATP6V0A4Q9HBG4 840 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 KIAA1586Q9HCI6 787 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 SEPT9Q9UHD8 586 aaPredicted RBP17.32■□□□□ 0.36
LTBR-201ENST00000228918 ANAPC5Q9UJX4 755 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 SUFUQ9UMX1 484 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 TELO2Q9Y4R8 837 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 RIPK3Q9Y572 518 aa17.32■□□□□ 0.36
LTBR-201ENST00000228918 VWA5AO00534 786 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 MAFGO15525 162 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 THAP12O43422 761 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 SNX3O60493 162 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 C4BPAP04003 597 aaKnown RBP17.31■□□□□ 0.36
LTBR-201ENST00000228918 ACO1P21399 889 aaKnown RBP17.31■□□□□ 0.36
LTBR-201ENST00000228918 SWSAP1Q6NVH7 229 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 CCDC50Q8IVM0 306 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 CCDC60Q8IWA6 550 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms