RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 ZNF286BP0CG31 522 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 TGFB2P61812 414 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 PPP2R5CQ13362 524 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 SMTNL2Q2TAL5 461 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 WLSQ5T9L3 541 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 FAM160B1Q5W0V3 765 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 PCNX4Q63HM2 1172 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 DAW1Q8N136 415 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 KRT35Q92764 455 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 CALN1Q9BXU9 219 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 KRT15P19012 456 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 SFNP31947 248 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 RAP1GAPP47736 663 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 GPC5P78333 572 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 LIN9Q5TKA1 542 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 HGSNATQ68CP4 663 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 BTNL9Q6UXG8 535 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 PRUNE1Q86TP1 453 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 FAM228AQ86W67 206 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 SLC17A8Q8NDX2 589 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 CDHR1Q96JP9 859 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 GMLQ99445 158 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 TTYH3Q9C0H2 523 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 MTMR12Q9C0I1 747 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 GPRC5DQ9NZD1 345 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 DSG3P32926 999 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 PSMC4P43686 418 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 ZCWPW2Q504Y3 356 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 TPCN2Q8NHX9 752 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 PSPC1Q8WXF1 523 aaKnown RBP13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 FBXL5Q9UKA1 691 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 TTLL3Q9Y4R7 772 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 DGAT1O75907 488 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 SLC8A3P57103 927 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 PPP2R2AP63151 447 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 MTMR3Q13615 1198 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 XKR3Q5GH77 459 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 PBKQ96KB5 322 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 MRIQ9BWK5 157 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 GANQ9H2C0 597 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 R3HDMLQ9H3Y0 253 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 VPS37BQ9H9H4 285 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 CYP39A1Q9NYL5 469 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 PARP2Q9UGN5 583 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 GAS8O95995 478 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 GNA15P30679 374 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 RGS7P49802 495 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 PLCB4Q15147 1175 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 PRAMEF19Q5SWL8 479 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 C10orf76Q5T2E6 689 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 CPB2Q96IY4 423 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 SUCLA2Q9P2R7 463 aaPredicted RBP13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 ZNF536O15090 1300 aa13.73□□□□□ -0.21
PCDHB4-201ENST00000194152 SPDYE16A6NNV3 312 aaPredicted RBP13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 DYNC1LI2O43237 492 aaPredicted RBP13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 PECAM1P16284 738 aaPredicted RBP13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 PTGER2P43116 358 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 PAPOLAP51003 745 aaKnown RBP13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 CDH8P55286 799 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 VSIG10LQ86VR7 867 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 B4GALNT2Q8NHY0 566 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 LNX1Q8TBB1 728 aaPredicted RBP13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 RFFLQ8WZ73 363 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 SEMA4DQ92854 862 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 OPTNQ96CV9 577 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 OLFML3Q9NRN5 406 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 NKIRAS1Q9NYS0 192 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 RNF14Q9UBS8 474 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 POC1B-GALNT4F8VUJ3 575 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 TNNC2P02585 160 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 LRRC14Q15048 493 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 HSDL1Q3SXM5 330 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 TMEM63BQ5T3F8 832 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 IRF2BP2Q7Z5L9 587 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 HEXIM2Q96MH2 286 aaKnown RBP13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 C10orf88Q9H8K7 445 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 ZC3H4Q9UPT8 1303 aaKnown RBP13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 CHD4Q14839 1912 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 MYH15Q9Y2K3 1946 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 KLHL33A6NCF5 533 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 PIAS1O75925 651 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 TNFSF9P41273 254 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 C18orf8Q96DM3 657 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 SPATC1LQ9H0A9 340 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 INTS9Q9NV88 658 aaKnown RBP13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 IGSF9BQ9UPX0 1349 aa13.72□□□□□ -0.21
PCDHB4-201ENST00000194152 CYP2B6P20813 491 aa13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 RRM1P23921 792 aa13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 HIRAP54198 1017 aaPredicted RBP13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 ARMC9Q7Z3E5 817 aa13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 LRRN4Q8WUT4 740 aa13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 TEKT4Q8WW24 435 aa13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 CASKIN2Q8WXE0 1202 aa13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 DDX23Q9BUQ8 820 aaKnown RBP13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 MIS12Q9H081 205 aa13.71□□□□□ -0.21
PCDHB4-201ENST00000194152 NSRP1Q9H0G5 558 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms