RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Celf4Q7TSY6 486 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Lrfn2Q80TG9 788 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Best2Q8BGM5 508 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gpc3Q8CFZ4 579 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Per2O54943 1257 aa16.27■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ptk2P34152 1090 aa16.27■□□□□ 0.19
Upf1-202ENSMUST00000215817 Q5XFZ0 217 aa16.27■□□□□ 0.19
Upf1-202ENSMUST00000215817 FancbQ5XJY6 703 aa16.27■□□□□ 0.19
Upf1-202ENSMUST00000215817 Shc3Q61120 474 aa16.27■□□□□ 0.19
Upf1-202ENSMUST00000215817 Neto2Q8BNJ6 525 aa16.27■□□□□ 0.19
Upf1-202ENSMUST00000215817 Azin2Q8BVM4 459 aa16.27■□□□□ 0.19
Upf1-202ENSMUST00000215817 Filip1Q9CS72 1211 aa16.27■□□□□ 0.19
Upf1-202ENSMUST00000215817 PdclQ9DBX2 301 aa16.27■□□□□ 0.19
Upf1-202ENSMUST00000215817 Pate3B3GLJ3 98 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Cd70O55237 195 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Kcnj6P48542 425 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Gjb6P70689 261 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Taf1bP97358 586 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 FsbpQ8BKE5 299 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Gramd4Q8CB44 633 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Zbtb9Q8CDC7 459 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Barx2O08686 283 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ifnb1P01575 182 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tulp2P46686 562 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Adcy8P97490 1249 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Drp2Q05AA6 957 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Prm3Q62100 101 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Cog3Q8CI04 820 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Bclaf1Q8K019 919 aaKnown RBP16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Olfr30Q8VGD8 315 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Pcdha9Q91Y11 979 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 TrabdQ99JY4 376 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Prc1Q99K43 603 aaKnown RBP16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ism1A2ATD1 454 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Gm3138K7N754 218 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 CttnQ60598 546 aaKnown RBP16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Olfr8Q60892 310 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Wdr11Q8K1X1 1223 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Kdm4bQ91VY5 1086 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tc2nQ91XT6 489 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Cdc42ep4Q9JM96 349 aaKnown RBP16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 NumbQ9QZS3 653 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Rad9bQ6WBX7 403 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Spata2Q8K004 515 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ankef1Q9D2J7 775 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Chst7Q9EP78 484 aa16.26■□□□□ 0.19
Upf1-202ENSMUST00000215817 Hmx1O70218 332 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 FlgP11088 336 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ppm1jQ149T7 507 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Klra9Q2TJJ8 266 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Gngt1Q61012 74 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 OcrlQ6NVF0 900 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 DgkeQ9R1C6 564 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Zfp831A2ADM8 1628 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Cyp2b23E9Q593 491 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 CraddO88843 199 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Gjb1P28230 283 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Drc1Q3USS3 753 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Atp11bQ6DFW5 1175 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tdpoz2Q717B2 364 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ccdc65Q8VHI7 493 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Nop56Q9D6Z1 580 aaKnown RBP16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tmem206Q9D771 350 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Olfr711Q9EPG2 314 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ighv11-2A0A075B5R8 117 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Nr1i3O35627 358 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Rdh7O88451 316 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Aldh1a1P24549 501 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Anxa5P48036 319 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tubb4bP68372 445 aaKnown RBP16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Cdh8P97291 799 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Panx2Q6IMP4 677 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 AdalQ80SY6 360 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Prpsap2Q8R574 369 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Msantd4Q91YU3 345 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Upf1Q9EPU0 1124 aaKnown RBP16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Cpsf3Q9QXK7 684 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Trpc7Q9WVC5 862 aa16.25■□□□□ 0.19
Upf1-202ENSMUST00000215817 Shank3Q4ACU6 1730 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Cfap221A9Q751 836 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Heatr4E9Q357 955 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 AgtP11859 477 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Mmp3P28862 477 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ap1m1P35585 423 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Myh3P13541 1940 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 SprtnG3X912 497 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Sycp3P70281 254 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Znf507Q6ZPY5 941 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tmem117Q8BH18 514 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tmprss4Q8VCA5 435 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Rnf112Q96DY5 654 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ppp1r3aQ99MR9 1089 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tbx20Q9ES03 445 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Adgrf5G5E8Q8 1348 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 1700031M16RikA0A087WSH0 82 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Rabgap1lA6H6A9 815 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Taf4bG5E8Z2 855 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 XlrP05531 208 aa16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 KhsrpQ3U0V1 748 aaKnown RBP16.24■□□□□ 0.19
Upf1-202ENSMUST00000215817 Lrrc55Q3UY51 311 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms