RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Plekhh3Q8VCE9 796 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Q91Z58 1206 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Sntg2Q925E0 539 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Cxcl11Q9JHH5 100 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Dlg5E9Q9R9 1921 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Gm8257E9Q8R3 264 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Gm1661E9Q963 441 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Cyth3O08967 399 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Camk4P08414 469 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Atxn10P28658 475 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Gsta3P30115 221 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Cav1P49817 178 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 SftpbP50405 377 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 InhbcP55104 352 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Olfr832Q7TRG9 312 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Dlg1Q811D0 905 aaKnown RBP13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Lrrc24Q8BHA1 521 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 HnrnprQ8VHM5 632 aaKnown RBP13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Krt34Q9D646 392 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Cpb1B2RS76 415 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Gsta4P24472 222 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Caprin2Q05A80 1031 aaKnown RBP13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Fam172aQ3TNH5 417 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Olfr301Q7TS04 311 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Chtf18Q8BIW9 969 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Olfr449Q8VGW8 311 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Rab11fip1Q9D620 645 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Krt16Q9Z2K1 469 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Slit1Q80TR4 1531 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Gm13023A2A8N2 498 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Olfr1145A2AVC7 325 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 MttpO08601 894 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 AladP10518 330 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Pax3P24610 479 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 LynP25911 512 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 AdssP46664 456 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Rasa2P58069 847 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 OtulinQ3UCV8 352 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Hmgb4Q6P8W9 181 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Kcnt1Q6ZPR4 1224 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Pramel6Q810Y9 485 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Q8CIL4 281 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Znf426Q8R1D1 550 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 PhykplQ8R1K4 467 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Ces1Q8VCC2 565 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 YarsQ91WQ3 528 aaKnown RBP13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Pcdhb12Q91Y07 789 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Nme5Q99MH5 211 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 GsdmcQ99NB5 468 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Tmed10Q9D1D4 219 aaKnown RBP13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Mtmr9Q9Z2D0 545 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Dip2bQ3UH60 1574 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Marcksl1P28667 200 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Nub1P54729 614 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Dnajc5P60904 198 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Akap7Q7TN79 314 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Sfr1Q8BP27 319 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Calhm6Q8C9E8 313 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Lrif1Q8CDD9 755 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Spdl1Q923A2 608 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Bap1Q99PU7 728 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 DmgdhQ9DBT9 869 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Adarb2Q9JI20 745 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Ubr1O70481 1757 aa13.01□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Aox3G3X982 1335 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Gm3636E9Q5P1 227 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Cyp2a4P15392 494 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Cyp2a5P20852 494 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Gbp10Q000W5 611 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Inf2Q0GNC1 1273 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Lin9Q8C735 542 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Lzts2Q91YU6 671 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Mfsd5Q921Y4 450 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Tmem53Q9D0Z3 276 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Mageb4A2A9R3 556 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Apol7bB1AQP7 369 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Kcnn2P58390 839 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Aak1Q3UHJ0 959 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Apol7eQ3UZ24 369 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Ppp4r3cQ3V0Y1 813 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Tnni3kQ5GIG6 834 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Arhgap10Q6Y5D8 786 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Q80WR5 230 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Rnf168Q80XJ2 565 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Rps6kc1Q8BLK9 1056 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Mill1Q8HWE7 395 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Gps1Q99LD4 471 aaKnown RBP13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Zcrb1Q9CZ96 217 aaKnown RBP13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Gins2Q9D600 185 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Vmn2r77L7N2B7 854 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Aco1P28271 889 aaKnown RBP13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Pik3caP42337 1068 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Sema4aQ62178 760 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Scube1Q6NZL8 1018 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 AsphQ8BSY0 741 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Kctd10Q922M3 315 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Usp26Q99MX1 835 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Txndc12Q9CQU0 170 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Fam111aQ9D2L9 613 aa13□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Rbm31yQ9D3U4 565 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms