RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Gm7995L7N2E4 160 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Fgfr1P16092 822 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ces1cP23953 554 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 PklrP53657 574 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Eef1dP57776 281 aaKnown RBP12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Grm2Q14BI2 872 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Pdlim7Q3TJD7 457 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Orai2Q8BH10 250 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cuedc2Q9CXX9 284 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Htra2Q9JIY5 458 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Olig1Q9JKN5 260 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Noc2lQ9WV70 747 aaKnown RBP12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Atrnl1Q6A051 1378 aa12.21□□□□□ -0.46
Vps54-202ENSMUST00000109578 Gm5795E9PZN8 263 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 CaluO35887 315 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cd70O55237 195 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 ThbdP15306 577 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Psen2Q61144 448 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 C2cd2lQ80X80 706 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Sh3rf3Q8C120 878 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 PreplQ8C167 725 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cd248Q91V98 765 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rab11fip1Q9D620 645 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Sned1Q70E20 1403 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Lamb2Q61292 1799 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Prdm12A2AJ77 365 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 EloblA6PWE0 161 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Banf1O54962 89 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Atp13a5Q3TYU2 1216 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 FaxcQ3UMF9 409 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rnf139Q7TMV1 668 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Klhl29Q80T74 875 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Wrap53Q8VC51 532 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Nudt5Q9JKX6 218 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Itgb4A2A863 1818 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 UtrnE9Q6R7 3430 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rcn1Q05186 325 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Dsg1aQ61495 1057 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Gm2163Q6PCY5 473 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Slc9c1Q6UJY2 1175 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ttc1Q91Z38 292 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Golga1Q9CW79 758 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Pdcd7Q9WTY1 482 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Myh9Q8VDD5 1960 aaKnown RBP12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Pds5aQ6A026 1332 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 TroapB7ZNG4 668 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Zfp953Q3UPV7 304 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tom1l2Q5SRX1 507 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 CbarpQ66L44 698 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Hars2Q99KK9 505 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Npm3Q9CPP0 175 aaKnown RBP12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Gtf3c6Q9D8P7 227 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 1700016D06RikQ9DAA5 166 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Pdk2Q9JK42 407 aa12.2□□□□□ -0.46
Vps54-202ENSMUST00000109578 Eddm13E9Q7F5 164 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Nrg3O35181 713 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Slc27a2O35488 620 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 PtpreP49446 699 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Nrp1P97333 923 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Slc10a4Q3UEZ8 437 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Nat8lQ3UGX3 299 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tgfbrap1Q3UR70 860 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Fam81aQ3UXZ6 364 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Trim80Q3V061 624 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tgoln2Q62314 363 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ankfy1Q810B6 1169 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Nipa1Q8BHK1 323 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tph2Q8CGV2 488 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rhobtb2Q91V93 728 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cdk9Q99J95 372 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Hdac9Q99N13 588 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 DmgdhQ9DBT9 869 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Gm11549A0A286YD83 63 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tff2Q03404 129 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Capn13Q3UW68 665 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Vmn2r26Q6TAC4 855 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Wasf2Q8BH43 497 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Hook3Q8BUK6 718 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Kcnq4Q9JK97 696 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Rabgef1Q9JM13 491 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Zfp839E9PUU5 921 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cops2P61202 443 aaKnown RBP12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cdca2Q14B71 982 aaKnown RBP12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ankmy2Q3TPE9 440 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Upf3bQ3ULL6 472 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 A1cfQ5YD48 595 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Tdpoz4Q6YCH2 370 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Bri3bpQ8BXV2 253 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 HibchQ8QZS1 385 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ero1aQ8R180 464 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Usp33Q8R5K2 909 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Polr3fQ921X6 316 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Ankef1Q9D2J7 775 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Hsf2bpQ9D4G2 338 aa12.19□□□□□ -0.46
Vps54-202ENSMUST00000109578 Apol8A2VDH7 339 aaKnown RBP12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Srsf11E9Q6E5 511 aaKnown RBP12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Trim43bP86448 445 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cnga4Q3UW12 575 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Cwf19l1Q8CI33 537 aa12.18□□□□□ -0.46
Vps54-202ENSMUST00000109578 Speer2E9Q9U2 264 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms