RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Grik3B1AS29 919 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Aoc3O70423 765 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 GmnnO88513 206 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 P04214 136 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Pik3caP42337 1068 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Abcd1P48410 736 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Kcnj4P52189 445 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Slc12a1P55014 1095 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Bach2P97303 839 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Rapgef1Q3UHC1 1224 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 RragaQ80X95 313 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Acad11Q80XL6 779 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Npas4Q8BGD7 802 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 GopcQ8BH60 463 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Arid5bQ8BM75 1188 aaKnown RBP9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Lrch3Q8BVU0 778 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Rint1Q8BZ36 792 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 AdigQ8R400 80 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Mtmr6Q8VE11 617 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Olfr1352Q8VGX5 309 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Mob2Q8VI63 235 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Spred2Q924S7 410 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Tlcd1Q99JT6 247 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Sdcbp2Q99JZ0 292 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Fuca2Q99KR8 461 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Gnl2Q99LH1 728 aaKnown RBP9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Fuca1Q99LJ1 452 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Tlr3Q99MB1 905 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Gtpbp4Q99ME9 634 aaKnown RBP9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 PirQ9D711 290 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Doc2gQ9ESN1 387 aa9.53□□□□□ -0.88
Ccdc28a-201ENSMUST00000052648 Prdm12A2AJ77 365 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Mroh4G3X8W1 983 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tpp1O89023 562 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Serpinc1P32261 465 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Nub1P54729 614 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ptcd3Q14C51 685 aaKnown RBP9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Trim72Q1XH17 477 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Q3TTJ4 293 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 ItgaeQ60677 1167 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ovgp1Q62010 721 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gucy2gQ6TL19 1100 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Znf12Q7TSI0 686 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 GnsQ8BFR4 544 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 KyQ8C8H8 661 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gnl3Q8CI11 538 aaKnown RBP9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 PdxkQ8K183 312 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 DutQ8VCG1 200 aaKnown RBP9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tom1l1Q923U0 474 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Chst12Q99LL3 419 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 1700020D05RikQ99PB1 294 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Mageb16Q9CWV4 363 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Mzb1Q9D8I1 188 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dnajc7Q9QYI3 494 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Rnf25Q9QZR0 456 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Cntnap5aQ0V8T9 1304 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 1700001O22RikA2APZ1 375 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm8369E9PZI3 166 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ptgs2Q05769 604 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dsg1aQ61495 1057 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Crtc1Q68ED7 630 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Spata20Q80YT5 790 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Wdr3Q8BHB4 942 aaKnown RBP9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Abi1Q8CBW3 481 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Kat5Q8CHK4 513 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Colgalt1Q8K297 617 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Plekhh3Q8VCE9 796 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Olfr385Q8VGT1 312 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dkc1Q9ESX5 509 aaKnown RBP9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Sfmbt1Q9JMD1 863 aa9.52□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 2210011C24RikA0A087WQ89 206 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm4846B2RWH8 538 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Fam124aD3Z5V4 536 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Bcl7cO08664 217 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Adam15O88839 864 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tpm3P21107 285 aaKnown RBP9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gnl1P36916 607 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Wdr5P61965 334 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Myo1fP70248 1099 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Hvcn1Q3U2S8 269 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Vps72Q62481 368 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Arl5cQ6P068 179 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Zfp251Q6PCX8 632 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Cd300lfQ6SJQ7 337 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Crybg3Q80W49 1005 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Lrrc8aQ80WG5 810 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dclk3Q8BWQ5 790 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gtpbp10Q8K013 366 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Phldb2Q8K1N2 1249 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Cbwd1Q8VEH6 393 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Cwh43Q91YL7 699 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 B3galt6Q91Z92 325 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Bbox1Q924Y0 387 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Map4k3Q99JP0 894 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Them5Q9CQJ0 248 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Erich6bQ9D4S6 220 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Drap1Q9D6N5 205 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Cacng4Q9JJV4 327 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Egfl6Q9JJZ5 550 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Hyou1Q9JKR6 999 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms