RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Il33Q8BVZ5 266 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gnl3Q8CI11 538 aaKnown RBP19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Ciapin1Q8WTY4 309 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Psmd6Q99JI4 389 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Rnf135Q9CWS1 417 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Cyp39a1Q9JKJ9 470 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 CtsfQ9R013 462 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Znf394Q9Z1D9 521 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Lrrc10bG3XA50 292 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Xbp1O35426 267 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Bcat1P24288 386 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 GckP52792 465 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Ephb2P54763 986 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Eepd1Q3TGW2 569 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gbp4Q61107 620 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 CpQ61147 1061 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gpr156Q6PCP7 798 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Osbpl2Q8BX94 484 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Dus1lQ8C2P3 475 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Leg1Q8C6C9 337 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Ccdc137Q8R0K4 290 aaKnown RBP19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 NcaldQ91X97 193 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 IqcdQ9D3V1 458 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Q9DA42 136 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 AfmO89020 608 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Mt-CybP00158 381 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Pid1Q3UBG2 217 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Stip1Q60864 543 aaKnown RBP19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gpihbp1Q9D1N2 228 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Apol7bB1AQP7 369 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Pagr1bF6V0H0 108 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Aoc3O70423 765 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 PdgfraP26618 1089 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Wnt10bP48614 389 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Apol7eQ3UZ24 369 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Ece1Q4PZA2 769 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Tbc1d1Q60949 1255 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Q6DFW0 481 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 MogsQ80UM7 834 aaKnown RBP19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 DaglbQ91WC9 669 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Pcdhb3Q91XZ7 784 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Polr3fQ921X6 316 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Spc24Q9D083 201 aa19.9■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Prdm12A2AJ77 365 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Skint3A7TZF0 458 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 P01734 135 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tbx3P70324 741 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Nat8lQ3UGX3 299 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Pak4Q8BTW9 593 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tor1aip2Q8BYU6 502 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Olfr1499Q8VG65 314 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cd248Q91V98 765 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tnpo2Q99LG2 887 aaKnown RBP19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tmem206Q9D771 350 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Dusp21Q9D9D8 189 aa19.89■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 ThbdP15306 577 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Eno1P17182 434 aaKnown RBP19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Trim43bP86448 445 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Casp7P97864 303 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Dsg1aQ61495 1057 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ptrh1Q8BW00 204 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Prss23Q9D6X6 382 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Fundc1Q9DB70 155 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 EloblA6PWE0 161 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Zfp839E9PUU5 921 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Zfp212G3X8R7 492 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Rad54lP70270 747 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Vamp7P70280 220 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 VegfaQ00731 214 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ptgs2Q05769 604 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cnga4Q3UW12 575 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Psen2Q61144 448 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Nlrp4eQ66X19 978 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Sec23ipQ6NZC7 998 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Trmt13Q8BYH3 481 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cfap36Q8C6E0 343 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Sh2d5Q8JZW5 429 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cuedc2Q9CXX9 284 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Capn15Q9JLG8 1095 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Gyg1Q9R062 333 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Arhgef10Q8C033 1345 aa19.88■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Mageb2A2AHM0 380 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Fam155bA2BDP1 471 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Gm21962L7N280 338 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 PrkceP16054 737 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Smyd5Q3TYX3 416 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 CcnjlQ5SRT8 387 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 SkiQ60698 725 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Krt77Q6IFZ6 572 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Adat2Q6P6J0 191 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Acot11Q8VHQ9 594 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Fgfr1op2Q9CRA9 253 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Plekhg4A0A1L1SU27 1217 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 TroapB7ZNG4 668 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Clca3bE9PUL3 1044 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cst8P32766 142 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 PorP37040 678 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Lrch1P62046 709 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Wdr18Q4VBE8 431 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tdrd5Q5VCS6 1040 aa19.87■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms