RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 COS8P38723 381 aa2.2□□□□□ -2.06
snR35snR35 ERG28P40030 148 aa2.2□□□□□ -2.06
snR35snR35 RMR1P53060 241 aa2.2□□□□□ -2.06
snR35snR35 YGL088WP53151 121 aa2.2□□□□□ -2.06
snR35snR35 YML108WQ03759 105 aa2.2□□□□□ -2.06
snR35snR35 YPR172WQ06608 200 aa2.2□□□□□ -2.06
snR35snR35 GEP5Q12393 293 aa2.2□□□□□ -2.06
snR35snR35 GIS3Q12418 502 aa2.2□□□□□ -2.06
snR35snR35 SWI1P09547 1314 aa2.19□□□□□ -2.06
snR35snR35 RAD10P06838 210 aa2.19□□□□□ -2.06
snR35snR35 PRP18P33411 251 aaPredicted RBP2.19□□□□□ -2.06
snR35snR35 SIP3P38717 1229 aa2.19□□□□□ -2.06
snR35snR35 TIF34P40217 347 aaKnown RBP2.19□□□□□ -2.06
snR35snR35 YJL144WP47009 104 aa2.19□□□□□ -2.06
snR35snR35 RAD17P48581 401 aa2.19□□□□□ -2.06
snR35snR35 TRM9P49957 279 aa2.19□□□□□ -2.06
snR35snR35 BRR6P53062 197 aa2.19□□□□□ -2.06
snR35snR35 FYV6P53913 173 aa2.19□□□□□ -2.06
snR35snR35 INM2Q05533 292 aa2.19□□□□□ -2.06
snR35snR35 YOR268CQ08734 132 aa2.19□□□□□ -2.06
snR35snR35 YPR096CO13587 100 aa2.18□□□□□ -2.06
snR35snR35 KRE1P17260 313 aa2.18□□□□□ -2.06
snR35snR35 MIG1P27705 504 aa2.18□□□□□ -2.06
snR35snR35 PRX1P34227 261 aaKnown RBP2.18□□□□□ -2.06
snR35snR35 CBT1P36038 271 aaPredicted RBP2.18□□□□□ -2.06
snR35snR35 RCN1P36054 211 aa2.18□□□□□ -2.06
snR35snR35 SDH4P37298 181 aa2.18□□□□□ -2.06
snR35snR35 YER084WP40057 128 aa2.18□□□□□ -2.06
snR35snR35 OST2P46964 130 aa2.18□□□□□ -2.06
snR35snR35 MGA1P53050 456 aa2.18□□□□□ -2.06
snR35snR35 TOS8P53147 276 aa2.18□□□□□ -2.06
snR35snR35 SYF2P53277 215 aaPredicted RBP2.18□□□□□ -2.06
snR35snR35 DID2P69771 204 aa2.18□□□□□ -2.06
snR35snR35 RSM10Q03201 203 aa2.18□□□□□ -2.06
snR35snR35 MRPS17Q03246 237 aaPredicted RBP2.18□□□□□ -2.06
snR35snR35 YMR226CQ05016 267 aaKnown RBP2.18□□□□□ -2.06
snR35snR35 HEM25Q07534 307 aa2.18□□□□□ -2.06
snR35snR35 YPL229WQ99395 206 aa2.18□□□□□ -2.06
snR35snR35 IPP1P00817 287 aaKnown RBP2.17□□□□□ -2.06
snR35snR35 RPL28P02406 149 aaKnown RBP2.17□□□□□ -2.06
snR35snR35 CDC36P06100 191 aaPredicted RBP2.17□□□□□ -2.06
snR35snR35 DPM1P14020 267 aaKnown RBP2.17□□□□□ -2.06
snR35snR35 URA6P15700 204 aa2.17□□□□□ -2.06
snR35snR35 ERG24P32462 438 aaKnown RBP2.17□□□□□ -2.06
snR35snR35 YGP1P38616 354 aaKnown RBP2.17□□□□□ -2.06
snR35snR35 COG3P40094 801 aa2.17□□□□□ -2.06
snR35snR35 PEX17P40155 199 aa2.17□□□□□ -2.06
snR35snR35 YNL194CP40169 301 aa2.17□□□□□ -2.06
snR35snR35 RSM25P40496 264 aa2.17□□□□□ -2.06
snR35snR35 GON7P46984 123 aa2.17□□□□□ -2.06
snR35snR35 YJL016WP47072 561 aa2.17□□□□□ -2.06
snR35snR35 NUP57P48837 541 aa2.17□□□□□ -2.06
snR35snR35 YGL159WP53110 370 aa2.17□□□□□ -2.06
snR35snR35 GTR2P53290 341 aa2.17□□□□□ -2.06
snR35snR35 YMR279CQ03263 540 aa2.17□□□□□ -2.06
snR35snR35 PEX12Q04370 399 aa2.17□□□□□ -2.06
snR35snR35 YLR179CQ06252 201 aaKnown RBP2.17□□□□□ -2.06
snR35snR35 YLR030WQ07967 263 aa2.17□□□□□ -2.06
snR35snR35 YPL257WQ08974 193 aa2.17□□□□□ -2.06
snR35snR35 JLP1Q12358 412 aa2.17□□□□□ -2.06
snR35snR35 LSO2Q3E772 92 aaKnown RBP2.17□□□□□ -2.06
snR35snR35 HTL1Q9URQ5 78 aa2.17□□□□□ -2.06
snR35snR35 SIR4P11978 1358 aa2.16□□□□□ -2.06
snR35snR35 ADH3P07246 375 aaKnown RBP2.16□□□□□ -2.06
snR35snR35 YKR032WP36127 104 aa2.16□□□□□ -2.06
snR35snR35 RFC4P40339 323 aaKnown RBP2.16□□□□□ -2.06
snR35snR35 ARC15P40518 154 aaRIP-Chip data2.16□□□□□ -2.06not detected
snR35snR35 CAT5P41735 233 aa2.16□□□□□ -2.06
snR35snR35 YJR056CP47115 236 aa2.16□□□□□ -2.06
snR35snR35 CWC23P52868 283 aaPredicted RBP2.16□□□□□ -2.06
snR35snR35 ABF2Q02486 183 aa2.16□□□□□ -2.06
snR35snR35 MSA1Q08471 629 aa2.16□□□□□ -2.06
snR35snR35 BBP1Q12365 385 aa2.16□□□□□ -2.06
snR35snR35 YOR020W-AQ3E824 90 aa2.16□□□□□ -2.06
snR35snR35 FAB1P34756 2278 aa2.16□□□□□ -2.06
snR35snR35 RPL26AP05743 127 aaKnown RBP2.15□□□□□ -2.07
snR35snR35 CCA1P21269 546 aa2.15□□□□□ -2.07
snR35snR35 YPT52P36018 234 aaKnown RBP2.15□□□□□ -2.07
snR35snR35 MSA2P36157 363 aa2.15□□□□□ -2.07
snR35snR35 RPF1P38805 295 aaKnown RBP2.15□□□□□ -2.07
snR35snR35 PIR5P46999 287 aa2.15□□□□□ -2.07
snR35snR35 IRC18P47056 224 aa2.15□□□□□ -2.07
snR35snR35 ADO1P47143 340 aaKnown RBP2.15□□□□□ -2.07
snR35snR35 ALG13P53178 202 aa2.15□□□□□ -2.07
snR35snR35 RPL26BP53221 127 aaKnown RBP2.15□□□□□ -2.07
snR35snR35 CUS2P53830 285 aaPredicted RBP2.15□□□□□ -2.07
snR35snR35 YML096WQ04489 525 aa2.15□□□□□ -2.07
snR35snR35 SSQ1Q05931 657 aaPredicted RBP2.15□□□□□ -2.07
snR35snR35 GET4Q12125 312 aa2.15□□□□□ -2.07
snR35snR35 SAS5Q99314 248 aa2.15□□□□□ -2.07
snR35snR35 YDR157WA0A023PZE8 133 aa2.14□□□□□ -2.07
snR35snR35 DSF1P0CX08 502 aa2.14□□□□□ -2.07
snR35snR35 YNR073CP0CX09 502 aa2.14□□□□□ -2.07
snR35snR35 IDH1P28834 360 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
snR35snR35 TAF14P35189 244 aa2.14□□□□□ -2.07
snR35snR35 SRY1P36007 326 aa2.14□□□□□ -2.07
snR35snR35 IKI1P38874 309 aa2.14□□□□□ -2.07
snR35snR35 YER188WP40103 239 aa2.14□□□□□ -2.07
snR35snR35 FIS1P40515 155 aa2.14□□□□□ -2.07
snR35snR35 RPA43P46669 326 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms