RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	MEK1	P24719	497 aa	Predicted RBP	4.25	□□□□□ -1.73
UBA3	YPR066W	NUP2	P32499	720 aa		4.25	□□□□□ -1.73
UBA3	YPR066W	YKL070W	P36087	169 aa		4.25	□□□□□ -1.73
UBA3	YPR066W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
UBA3	YPR066W	MPM1	P40364	252 aa		4.25	□□□□□ -1.73
UBA3	YPR066W	ATG18	P43601	500 aa		4.25	□□□□□ -1.73
UBA3	YPR066W	YFR057W	P43625	151 aa		4.25	□□□□□ -1.73
UBA3	YPR066W	LOH1	P47055	219 aa		4.25	□□□□□ -1.73
UBA3	YPR066W	EMC2	P47133	292 aa	Known RBP	4.25	□□□□□ -1.73
UBA3	YPR066W	CRH1	P53301	507 aa		4.25	□□□□□ -1.73
UBA3	YPR066W	YTH1	Q06102	208 aa	Predicted RBP	4.25	□□□□□ -1.73
UBA3	YPR066W	MCT1	Q12283	360 aa		4.25	□□□□□ -1.73
UBA3	YPR066W	PSF1	Q12488	208 aa		4.25	□□□□□ -1.73
UBA3	YPR066W	SAL1	D6W196	494 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	KRE6	P32486	720 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	AST2	P39945	430 aa	Known RBP	4.24	□□□□□ -1.73
UBA3	YPR066W	YGR210C	P42942	411 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	YNL033W	P53964	284 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	YNL019C	P53975	284 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	SWP1	Q02795	286 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	YDR476C	Q03362	224 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	API2	Q04413	109 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	IRC25	Q07951	179 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	YRA1	Q12159	226 aa	Known RBP	4.24	□□□□□ -1.73
UBA3	YPR066W	JID1	Q12350	301 aa		4.24	□□□□□ -1.73
UBA3	YPR066W	WTM1	Q12363	437 aa	Known RBP	4.24	□□□□□ -1.73
UBA3	YPR066W	ADH2	P00331	348 aa	Known RBP	4.23	□□□□□ -1.73
UBA3	YPR066W	ZWF1	P11412	505 aa	Known RBP	4.23	□□□□□ -1.73
UBA3	YPR066W	KSS1	P14681	368 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	RPS1B	P23248	255 aa	Known RBP	4.23	□□□□□ -1.73
UBA3	YPR066W	RVS161	P25343	265 aa	Known RBP	4.23	□□□□□ -1.73
UBA3	YPR066W	CSM1	P25651	190 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	ACB1	P31787	87 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	ECM34	P38728	170 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	YPI1	P43587	155 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	MIG2	P53035	382 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	YLR460C	P54007	376 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	GGA1	Q06336	557 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	YDL211C	Q12121	372 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	FRE8	Q12209	686 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	YPR1	Q12458	312 aa		4.23	□□□□□ -1.73
UBA3	YPR066W	ERD1	P16151	362 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	SCO1	P23833	295 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	SKG1	P36169	355 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	SWD3	P38123	315 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	NSG1	P38837	291 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	APS3	P47064	194 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	KEL2	P50090	882 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	MKC7	P53379	596 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	NSL1	Q12143	216 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	YOR032W-A	Q8TGS1	66 aa		4.22	□□□□□ -1.73
UBA3	YPR066W	SEC16	P48415	2195 aa	Known RBP	4.21	□□□□□ -1.73
UBA3	YPR066W	PBN1	P25580	416 aa		4.21	□□□□□ -1.74
UBA3	YPR066W	YOR062C	P36025	268 aa		4.21	□□□□□ -1.74
UBA3	YPR066W	VPS51	P36116	164 aa		4.21	□□□□□ -1.74
UBA3	YPR066W	RIB1	P38066	345 aa		4.21	□□□□□ -1.74
UBA3	YPR066W	PDX3	P38075	228 aa	Known RBP	4.21	□□□□□ -1.74
UBA3	YPR066W	DTR1	P38125	572 aa		4.21	□□□□□ -1.74
UBA3	YPR066W	LSM12	P38828	187 aa	Known RBP	4.21	□□□□□ -1.74
UBA3	YPR066W	OKP1	P53298	406 aa		4.21	□□□□□ -1.74
UBA3	YPR066W	MIX14	Q04341	121 aa		4.21	□□□□□ -1.74
UBA3	YPR066W	DCR2	Q05924	578 aa		4.21	□□□□□ -1.74
UBA3	YPR066W	GAS2	Q06135	555 aa		4.21	□□□□□ -1.74
UBA3	YPR066W	RPL5	P26321	297 aa	Known RBP	4.2	□□□□□ -1.74
UBA3	YPR066W	PEX18	P38855	283 aa		4.2	□□□□□ -1.74
UBA3	YPR066W	AIM10	P39965	576 aa	Known RBP	4.2	□□□□□ -1.74
UBA3	YPR066W	RPS12	P48589	143 aa	Known RBP	4.2	□□□□□ -1.74
UBA3	YPR066W	SNX41	Q04053	625 aa		4.2	□□□□□ -1.74
UBA3	YPR066W	RNH202	Q05635	350 aa		4.2	□□□□□ -1.74
UBA3	YPR066W	SSQ1	Q05931	657 aa	Predicted RBP	4.2	□□□□□ -1.74
UBA3	YPR066W	SPO77	Q06134	477 aa		4.2	□□□□□ -1.74
UBA3	YPR066W	ARV1	Q06541	321 aa		4.2	□□□□□ -1.74
UBA3	YPR066W	GPI11	Q06636	219 aa		4.2	□□□□□ -1.74
UBA3	YPR066W	ATP16	Q12165	160 aa		4.2	□□□□□ -1.74
UBA3	YPR066W	FMP16	Q12497	93 aa		4.2	□□□□□ -1.74
UBA3	YPR066W	THP2	O13539	261 aa	Known RBP	4.19	□□□□□ -1.74
UBA3	YPR066W	TIM9	O74700	87 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	RAD7	P06779	565 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	ATG15	P25641	520 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
UBA3	YPR066W	ECT1	P33412	323 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	TPO5	P36029	618 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	OXA1	P39952	402 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	GET1	P53192	235 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	COS6	P53344	381 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	YLR446W	Q06204	433 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	PBP4	Q07362	185 aa	Known RBP	4.19	□□□□□ -1.74
UBA3	YPR066W	RSA1	Q08932	381 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	YOS9	Q99220	542 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	Q0144	Q9ZZW2	109 aa		4.19	□□□□□ -1.74
UBA3	YPR066W	MDH2	P22133	377 aa		4.18	□□□□□ -1.74
UBA3	YPR066W	MIR1	P23641	311 aa	Known RBP	4.18	□□□□□ -1.74
UBA3	YPR066W	RAD51	P25454	400 aa		4.18	□□□□□ -1.74
UBA3	YPR066W	ITR2	P30606	609 aa		4.18	□□□□□ -1.74
UBA3	YPR066W	YMR262W	P38430	313 aa		4.18	□□□□□ -1.74
UBA3	YPR066W	BIG1	P38813	335 aa		4.18	□□□□□ -1.74
UBA3	YPR066W	MIG3	P39943	394 aa		4.18	□□□□□ -1.74
UBA3	YPR066W	SOK1	P40317	901 aa		4.18	□□□□□ -1.74
UBA3	YPR066W	DFG10	P40526	253 aa		4.18	□□□□□ -1.74
UBA3	YPR066W	TPS1	Q00764	495 aa	Known RBP	4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms