RNA–Protein interactions for RNA: YOL143C

RIB4, Transcript of Lumazine synthase (DMRL synthase), yeast

Gene RIB4, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIB4	YOL143C	NUP116	Q02630	1113 aa		3.13	□□□□□ -1.91
RIB4	YOL143C	GRX5	Q02784	150 aa		3.13	□□□□□ -1.91
RIB4	YOL143C	MRP51	Q02950	344 aa		3.13	□□□□□ -1.91
RIB4	YOL143C	RCE1	Q03530	315 aa		3.13	□□□□□ -1.91
RIB4	YOL143C	RVB1	Q03940	463 aa	Known RBP	3.13	□□□□□ -1.91
RIB4	YOL143C	SPC19	Q03954	165 aa		3.13	□□□□□ -1.91
RIB4	YOL143C	BNA7	Q04066	261 aa		3.13	□□□□□ -1.91
RIB4	YOL143C	THP3	Q12049	470 aa	Known RBP	3.13	□□□□□ -1.91
RIB4	YOL143C	PST2	Q12335	198 aa	Known RBP	3.13	□□□□□ -1.91
RIB4	YOL143C	PCL9	Q12477	304 aa		3.13	□□□□□ -1.91
RIB4	YOL143C	NFT1	P0CE68	1218 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	SPO7	P18410	259 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	SUR1	P33300	382 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	MED8	P38304	223 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	EGD2	P38879	174 aa	Known RBP	3.12	□□□□□ -1.91
RIB4	YOL143C	YER084W	P40057	128 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	NQM1	P53228	333 aa	Predicted RBP	3.12	□□□□□ -1.91
RIB4	YOL143C	MNT4	P53745	580 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	CAF40	P53829	373 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	RPL6A	Q02326	176 aa	Known RBP	3.12	□□□□□ -1.91
RIB4	YOL143C	SNZ1	Q03148	297 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	RNH1	Q04740	348 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	YMR315W	Q04869	349 aa	Known RBP	3.12	□□□□□ -1.91
RIB4	YOL143C	YDL114W	Q07530	308 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	RTC5	Q12108	567 aa	Known RBP	3.12	□□□□□ -1.91
RIB4	YOL143C	MED2	Q12124	431 aa		3.12	□□□□□ -1.91
RIB4	YOL143C	CDC39	P25655	2108 aa	Known RBP	3.11	□□□□□ -1.91
RIB4	YOL143C	BLM10	P43583	2143 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	COX5B	P00425	151 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	PDE2	P06776	526 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	RPL3	P14126	387 aa	Known RBP	3.11	□□□□□ -1.91
RIB4	YOL143C	PCL1	P24867	279 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	ITR1	P30605	584 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	YME2	P32843	850 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	ECT1	P33412	323 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	MRPS5	P33759	307 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	YCR041W	P37265	110 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	SHE1	P38200	338 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	AIM10	P39965	576 aa	Known RBP	3.11	□□□□□ -1.91
RIB4	YOL143C	PDS1	P40316	373 aa	Predicted RBP	3.11	□□□□□ -1.91
RIB4	YOL143C	AVT7	P40501	490 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	MSS2	P40990	351 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	PFS2	P42841	465 aa	Known RBP	3.11	□□□□□ -1.91
RIB4	YOL143C	MOB2	P43563	287 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	SIP18	P50263	79 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	NUP49	Q02199	472 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	ODC1	Q03028	310 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	TLG1	Q03322	224 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	AIM36	Q03798	255 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	YDR387C	Q04162	555 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	NNT1	Q05874	261 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	RRP9	Q06506	573 aa	Known RBP	3.11	□□□□□ -1.91
RIB4	YOL143C	IPK1	Q06667	281 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	MCT1	Q12283	360 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	RTN2	Q12443	393 aa		3.11	□□□□□ -1.91
RIB4	YOL143C	SEC16	P48415	2195 aa	Known RBP	3.11	□□□□□ -1.91
RIB4	YOL143C	SCEI	P03882	235 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	MSW1	P04803	379 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	RPL35A	P0CX84	120 aa	Known RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	RPL35B	P0CX85	120 aa	Known RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	STE18	P18852	110 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	MEK1	P24719	497 aa	Predicted RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	YCL042W	P25572	119 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	ERG3	P32353	365 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	YKL187C	P34231	750 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	SRP102	P36057	244 aa	Predicted RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	ECM4	P36156	370 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	NAT2	P37293	288 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	PRS3	P38689	320 aa	Known RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	YHR035W	P38769	630 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	GAT2	P40209	560 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	GVP36	P40531	326 aa	Known RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	RMD9	P53140	646 aa	Known RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	SAY1	P53324	424 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	PET191	Q02772	108 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	TSR2	Q06672	205 aa	Known RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	SYC1	Q08553	188 aa	Predicted RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	FIT3	Q08907	204 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	RKM1	Q08961	583 aa	Predicted RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	YGK3	Q12222	375 aa	Predicted RBP	3.1	□□□□□ -1.91
RIB4	YOL143C	TRM10	Q12400	293 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	IZH2	Q12442	317 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	MED11	Q99278	115 aa		3.1	□□□□□ -1.91
RIB4	YOL143C	SPS4	P09937	338 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	IDP1	P21954	428 aa	Known RBP	3.09	□□□□□ -1.91
RIB4	YOL143C	KRR1	P25586	316 aa	Predicted RBP	3.09	□□□□□ -1.91
RIB4	YOL143C	CLG1	P35190	452 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	YBR096W	P38256	230 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	YBR220C	P38318	560 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	AVT6	P40074	448 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	OST1	P41543	476 aa	Known RBP	3.09	□□□□□ -1.91
RIB4	YOL143C	LOH1	P47055	219 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	CCC1	P47818	322 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	YIP1	P53039	248 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	YIP5	P53108	310 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	VOA1	P53262	265 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	MTM1	P53320	366 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	ASI3	P53983	676 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	YDR391C	Q04170	232 aa		3.09	□□□□□ -1.91
RIB4	YOL143C	YLR173W	Q06247	608 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms