RNA–Protein interactions for RNA: YNL325C

FIG4, Transcript of Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase, yeast

Gene FIG4, Length 2,640 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIG4	YNL325C	VPS13	Q07878	3144 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	MET2	P08465	486 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	KRE1	P17260	313 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	SEC14	P24280	304 aa	Known RBP	0.89	□□□□□ -2.27
FIG4	YNL325C	MIG1	P27705	504 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	ERG2	P32352	222 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	CAT2	P32796	670 aa	Known RBP	0.89	□□□□□ -2.27
FIG4	YNL325C	GDH2	P33327	1092 aa	Known RBP	0.89	□□□□□ -2.27
FIG4	YNL325C	THO1	P40040	218 aa	Known RBP	0.89	□□□□□ -2.27
FIG4	YNL325C	DDI1	P40087	428 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	COA1	P40452	197 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	AGX1	P43567	385 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	BUD13	P46947	266 aa	Predicted RBP	0.89	□□□□□ -2.27
FIG4	YNL325C	MRX5	P47007	382 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	COG7	P53195	279 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	CPD1	P53314	239 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	MAL13	P53338	473 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	AAH1	P53909	347 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	YPL247C	Q12523	523 aa		0.89	□□□□□ -2.27
FIG4	YNL325C	RPL26A	P05743	127 aa	Known RBP	0.88	□□□□□ -2.27
FIG4	YNL325C	RRT12	P25381	491 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	ECM13	P38195	257 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	YHL049C	P38722	271 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	YIL012W	P40551	113 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	ECO1	P43605	281 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	GLG2	P47011	380 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	PEX31	P53203	462 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	RPL26B	P53221	127 aa	Known RBP	0.88	□□□□□ -2.27
FIG4	YNL325C	RSM27	P53305	110 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	SWT21	P53873	357 aa	Predicted RBP	0.88	□□□□□ -2.27
FIG4	YNL325C	YMR209C	Q03648	457 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	MRX4	Q12467	430 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	YSR3	P23501	404 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	RIB7	P33312	244 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	ARN2	P38724	620 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	SMB1	P40018	196 aa	Known RBP	0.88	□□□□□ -2.27
FIG4	YNL325C	COG3	P40094	801 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	PRE6	P40303	254 aa	Known RBP	0.88	□□□□□ -2.27
FIG4	YNL325C	PIR5	P46999	287 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	TAD2	P47058	250 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	MIG2	P53035	382 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	VPS68	Q12016	184 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	POM33	Q12164	279 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	EMP46	Q12396	444 aa		0.88	□□□□□ -2.27
FIG4	YNL325C	RPL24A	P04449	155 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	SGA1	P08019	549 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	MET16	P18408	261 aa	Predicted RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	TAF14	P35189	244 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	PRS4	P38063	326 aa	Predicted RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	TDA11	P38854	504 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	TEM1	P38987	245 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	TIF34	P40217	347 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	ALG11	P53954	548 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	YMR166C	Q03829	368 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	COQ10	Q08058	207 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	CSM4	Q08955	156 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	ISD11	Q6Q560	94 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	YPR096C	O13587	100 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	VPS1	P21576	704 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	BMH1	P29311	267 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	CAM1	P29547	415 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	HOM6	P31116	359 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	CLB6	P32943	380 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	YKL075C	P36083	450 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	YBR096W	P38256	230 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	PHO89	P38361	574 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	PRS2	P38620	318 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	YIA6	P40556	373 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	ALG9	P53868	555 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	MYO5	Q04439	1219 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	COX20	Q04935	205 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	SDO1	Q07953	250 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	URA2	P07259	2214 aa	Known RBP	0.87	□□□□□ -2.27
FIG4	YNL325C	HFA1	P32874	2273 aa		0.87	□□□□□ -2.27
FIG4	YNL325C	UTR5	P32630	166 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	NIF3	P53081	288 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	MDM34	P53083	459 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	YGL034C	P53186	121 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	SRL4	Q03085	281 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	RRT8	Q08219	342 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	PER33	Q12144	273 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	ATG31	Q12421	196 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	POL2	P21951	2222 aa	Known RBP	0.86	□□□□□ -2.27
FIG4	YNL325C	MEC1	P38111	2368 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	HIS1	P00498	297 aa	Known RBP	0.86	□□□□□ -2.27
FIG4	YNL325C	RPO26	P20435	155 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	SCO1	P23833	295 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	QRI5	P32344	111 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	MRPL37	P36532	105 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	MRPL49	P40858	161 aa	Predicted RBP	0.86	□□□□□ -2.27
FIG4	YNL325C	RPE1	P46969	238 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	YJR141W	P47172	347 aa	Predicted RBP	0.86	□□□□□ -2.27
FIG4	YNL325C	YJR146W	P47174	117 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	MRH4	P53166	561 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	EMI1	Q04406	187 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	YPL229W	Q99395	206 aa		0.86	□□□□□ -2.27
FIG4	YNL325C	YMR316C-A	I2HB70	103 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	CCA1	P21269	546 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	DPB2	P24482	689 aa	Predicted RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	CWP1	P28319	239 aa		0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms