RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	DET1	Q99288	334 aa	Known RBP	6.48	□□□□□ -1.37
MSB3	YNL293W	BI3	Q9ZZW7	517 aa		6.48	□□□□□ -1.37
MSB3	YNL293W	MOT1	P32333	1867 aa		6.48	□□□□□ -1.37
MSB3	YNL293W	RPL40A	P0CH08	128 aa	Known RBP	6.47	□□□□□ -1.37
MSB3	YNL293W	RPL40B	P0CH09	128 aa	Known RBP	6.47	□□□□□ -1.37
MSB3	YNL293W	OLE1	P21147	510 aa	Known RBP	6.47	□□□□□ -1.37
MSB3	YNL293W	RIM1	P32445	135 aa	Known RBP	6.47	□□□□□ -1.37
MSB3	YNL293W	YBR071W	P38243	211 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	YHL041W	P38730	149 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	JHD1	P40034	492 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	PNC1	P53184	216 aa	Known RBP	6.47	□□□□□ -1.37
MSB3	YNL293W	HST3	P53687	447 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	PDR16	P53860	351 aa	Known RBP	6.47	□□□□□ -1.37
MSB3	YNL293W	TIM10	P87108	93 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	MRPL1	Q04599	285 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	POS5	Q06892	414 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	PAM18	Q07914	168 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	YRA1	Q12159	226 aa	Known RBP	6.47	□□□□□ -1.37
MSB3	YNL293W	SWM1	Q12379	170 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	LAS17	Q12446	633 aa		6.47	□□□□□ -1.37
MSB3	YNL293W	DOG1	P38774	246 aa		6.46	□□□□□ -1.37
MSB3	YNL293W	POP1	P41812	875 aa		6.46	□□□□□ -1.37
MSB3	YNL293W	SMD3	P43321	101 aa	Known RBP	6.46	□□□□□ -1.37
MSB3	YNL293W	YMR087W	Q04299	284 aa		6.46	□□□□□ -1.37
MSB3	YNL293W	ATG41	Q12048	136 aa		6.46	□□□□□ -1.37
MSB3	YNL293W	FCY22	Q12119	530 aa		6.46	□□□□□ -1.37
MSB3	YNL293W	YLL056C	Q12177	298 aa		6.46	□□□□□ -1.37
MSB3	YNL293W	YOL114C	Q12322	202 aa		6.46	□□□□□ -1.37
MSB3	YNL293W	FKS3	Q04952	1785 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	PCL1	P24867	279 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	YCR099C	P25657	155 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	OXA1	P39952	402 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	IRC22	P40006	225 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	RRG9	P40156	214 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	HMS2	P47175	358 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	PMT3	P47190	753 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	MSB3	P48566	633 aa	Predicted RBP	6.46	□□□□□ -1.38
MSB3	YNL293W	ERG25	P53045	309 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	TIM8	P57744	87 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	TPS1	Q00764	495 aa	Known RBP	6.46	□□□□□ -1.38
MSB3	YNL293W	ATG21	Q02887	496 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	TY1A-DR2	Q03964	440 aa	Known RBP	6.46	□□□□□ -1.38
MSB3	YNL293W	LOA1	Q06508	300 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	NOC4	Q06512	552 aa	Predicted RBP	6.46	□□□□□ -1.38
MSB3	YNL293W	DCI1	Q08558	271 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	YKL018C-A	Q3E7A7	99 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	IZH4	Q99393	312 aa		6.46	□□□□□ -1.38
MSB3	YNL293W	RPS28B	P0C0X0	67 aa	Known RBP	6.45	□□□□□ -1.38
MSB3	YNL293W	CUP2	P15315	225 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	AXL2	P38928	823 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	ERG28	P40030	148 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	FIS1	P40515	155 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	OYE3	P41816	400 aa	Predicted RBP	6.45	□□□□□ -1.38
MSB3	YNL293W	ERJ5	P43613	295 aa	Predicted RBP	6.45	□□□□□ -1.38
MSB3	YNL293W	SFH5	P47008	294 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	TYW3	P53177	273 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	COX18	P53239	316 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	BNA5	Q05979	453 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	SEI1	Q06058	285 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	RPS28A	Q3E7X9	67 aa	Predicted RBP	6.45	□□□□□ -1.38
MSB3	YNL293W	ISD11	Q6Q560	94 aa		6.45	□□□□□ -1.38
MSB3	YNL293W	TY2A-LR1	P0C2J4	438 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	YBR121C-A	P0C5L4	52 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	TY2A-C	P25383	438 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	IDH2	P28241	369 aa	Known RBP	6.44	□□□□□ -1.38
MSB3	YNL293W	MRPL16	P38064	232 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	NSA2	P40078	261 aa	Known RBP	6.44	□□□□□ -1.38
MSB3	YNL293W	BIT61	P47041	543 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	AVT1	P47082	602 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	BNS1	P50084	137 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	YLR460C	P54007	376 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	RCR2	Q03446	210 aa	Known RBP	6.44	□□□□□ -1.38
MSB3	YNL293W	TY2A-DR2	Q03483	438 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	PLB3	Q08108	686 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	LDS2	Q08218	356 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	MCA1	Q08601	432 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	TY2A-B	Q12260	438 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	TY2A-OR2	Q12293	438 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	TY2A-DR1	Q12392	438 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	TY2A-OR1	Q12439	438 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	TY2A-DR3	Q99303	438 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	HTA2	P04912	132 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	YKU70	P32807	602 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	TIM23	P32897	222 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	YOR062C	P36025	268 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	EMC3	P36039	253 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	YPT35	P38815	214 aa	Known RBP	6.44	□□□□□ -1.38
MSB3	YNL293W	SOL3	P38858	249 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	BAT1	P38891	393 aa	Known RBP	6.44	□□□□□ -1.38
MSB3	YNL293W	RPL13B	P40212	199 aa	Known RBP	6.44	□□□□□ -1.38
MSB3	YNL293W	MPM1	P40364	252 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	MAF1	P41910	395 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	APJ1	P53940	528 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	UBC7	Q02159	165 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	MRX8	Q05473	314 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	YOS1	Q3E834	85 aa		6.44	□□□□□ -1.38
MSB3	YNL293W	SEC4	P07560	215 aa	Known RBP	6.43	□□□□□ -1.38
MSB3	YNL293W	OAC1	P32332	324 aa		6.43	□□□□□ -1.38
MSB3	YNL293W	DCG1	P32460	244 aa		6.43	□□□□□ -1.38
MSB3	YNL293W	ADH5	P38113	351 aa	Known RBP	6.43	□□□□□ -1.38

Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms