RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeastyeast

Gene TIF11, Length 462 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIF11YMR260C ADF1Q2V2Q1 113 aa1.32□□□□□ -2.2
TIF11YMR260C IPP1P00817 287 aaKnown RBP1.31□□□□□ -2.2
TIF11YMR260C HIS3P06633 220 aa1.31□□□□□ -2.2
TIF11YMR260C SPT3P06844 337 aa1.31□□□□□ -2.2
TIF11YMR260C BCY1P07278 416 aaKnown RBP1.31□□□□□ -2.2
TIF11YMR260C IDH1P28834 360 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
TIF11YMR260C CBT1P36038 271 aaPredicted RBP1.31□□□□□ -2.2
TIF11YMR260C ECM13P38195 257 aa1.31□□□□□ -2.2
TIF11YMR260C ERG28P40030 148 aa1.31□□□□□ -2.2
TIF11YMR260C YER189WP40104 122 aa1.31□□□□□ -2.2
TIF11YMR260C RAD17P48581 401 aa1.31□□□□□ -2.2
TIF11YMR260C TRM9P49957 279 aa1.31□□□□□ -2.2
TIF11YMR260C MIC26P50087 233 aa1.31□□□□□ -2.2
TIF11YMR260C FYV6P53913 173 aa1.31□□□□□ -2.2
TIF11YMR260C YML108WQ03759 105 aa1.31□□□□□ -2.2
TIF11YMR260C JLP1Q12358 412 aa1.31□□□□□ -2.2
TIF11YMR260C YPL247CQ12523 523 aa1.31□□□□□ -2.2
TIF11YMR260C DRS2P39524 1355 aa1.31□□□□□ -2.2
TIF11YMR260C YLR462WO13556 202 aa1.3□□□□□ -2.2
TIF11YMR260C RAD10P06838 210 aa1.3□□□□□ -2.2
TIF11YMR260C CDC33P07260 213 aaKnown RBP1.3□□□□□ -2.2
TIF11YMR260C SNA3P14359 133 aa1.3□□□□□ -2.2
TIF11YMR260C URA6P15700 204 aa1.3□□□□□ -2.2
TIF11YMR260C SEC22P22214 214 aa1.3□□□□□ -2.2
TIF11YMR260C PPH21P23594 369 aa1.3□□□□□ -2.2
TIF11YMR260C TOM40P23644 387 aaKnown RBP1.3□□□□□ -2.2
TIF11YMR260C NTF2P33331 125 aaKnown RBP1.3□□□□□ -2.2
TIF11YMR260C URA8P38627 578 aaPredicted RBP1.3□□□□□ -2.2
TIF11YMR260C COS8P38723 381 aa1.3□□□□□ -2.2
TIF11YMR260C RTC3P38804 111 aaPredicted RBP1.3□□□□□ -2.2
TIF11YMR260C YEL075CP39972 122 aa1.3□□□□□ -2.2
TIF11YMR260C YNL194CP40169 301 aa1.3□□□□□ -2.2
TIF11YMR260C RFC4P40339 323 aaKnown RBP1.3□□□□□ -2.2
TIF11YMR260C HAM1P47119 197 aaKnown RBP1.3□□□□□ -2.2
TIF11YMR260C RMR1P53060 241 aa1.3□□□□□ -2.2
TIF11YMR260C MDM34P53083 459 aa1.3□□□□□ -2.2
TIF11YMR260C YGL034CP53186 121 aa1.3□□□□□ -2.2
TIF11YMR260C YNL046WP53956 172 aa1.3□□□□□ -2.2
TIF11YMR260C FAR8Q05040 523 aa1.3□□□□□ -2.2
TIF11YMR260C SSQ1Q05931 657 aaPredicted RBP1.3□□□□□ -2.2
TIF11YMR260C YLR179CQ06252 201 aaKnown RBP1.3□□□□□ -2.2
TIF11YMR260C YPL257WQ08974 193 aa1.3□□□□□ -2.2
TIF11YMR260C YRA1Q12159 226 aaKnown RBP1.3□□□□□ -2.2
TIF11YMR260C GEP5Q12393 293 aa1.3□□□□□ -2.2
TIF11YMR260C DCN1Q12395 269 aa1.3□□□□□ -2.2
TIF11YMR260C EMP46Q12396 444 aa1.3□□□□□ -2.2
TIF11YMR260C YKL183C-AQ3E765 70 aa1.3□□□□□ -2.2
TIF11YMR260C SWI1P09547 1314 aa1.3□□□□□ -2.2
TIF11YMR260C SIR4P11978 1358 aa1.3□□□□□ -2.2
TIF11YMR260C COX5AP00424 153 aa1.29□□□□□ -2.2
TIF11YMR260C ERD2P18414 219 aa1.29□□□□□ -2.2
TIF11YMR260C ERG24P32462 438 aaKnown RBP1.29□□□□□ -2.2
TIF11YMR260C RCN1P36054 211 aa1.29□□□□□ -2.2
TIF11YMR260C OST2P46964 130 aa1.29□□□□□ -2.2
TIF11YMR260C ADO1P47143 340 aaKnown RBP1.29□□□□□ -2.2
TIF11YMR260C YJR141WP47172 347 aaPredicted RBP1.29□□□□□ -2.2
TIF11YMR260C YJR149WP47177 404 aa1.29□□□□□ -2.2
TIF11YMR260C NUP57P48837 541 aa1.29□□□□□ -2.2
TIF11YMR260C BRR6P53062 197 aa1.29□□□□□ -2.2
TIF11YMR260C YGL159WP53110 370 aa1.29□□□□□ -2.2
TIF11YMR260C GIM3P53900 129 aa1.29□□□□□ -2.2
TIF11YMR260C MRPS17Q03246 237 aaPredicted RBP1.29□□□□□ -2.2
TIF11YMR260C YMD8Q03697 442 aa1.29□□□□□ -2.2
TIF11YMR260C YMR114CQ04471 368 aaKnown RBP1.29□□□□□ -2.2
TIF11YMR260C FCF1Q05498 189 aaPredicted RBP1.29□□□□□ -2.2
TIF11YMR260C INM2Q05533 292 aa1.29□□□□□ -2.2
TIF11YMR260C VPS68Q12016 184 aa1.29□□□□□ -2.2
TIF11YMR260C GET4Q12125 312 aa1.29□□□□□ -2.2
TIF11YMR260C TPO4Q12256 659 aa1.29□□□□□ -2.2
TIF11YMR260C BBP1Q12365 385 aa1.29□□□□□ -2.2
TIF11YMR260C NOT5Q12514 560 aaPredicted RBP1.29□□□□□ -2.2
TIF11YMR260C HTL1Q9URQ5 78 aa1.29□□□□□ -2.2
TIF11YMR260C HTB1P02293 131 aaKnown RBP1.28□□□□□ -2.2
TIF11YMR260C HTB2P02294 131 aa1.28□□□□□ -2.2
TIF11YMR260C RPL26AP05743 127 aaKnown RBP1.28□□□□□ -2.2
TIF11YMR260C DSF1P0CX08 502 aa1.28□□□□□ -2.2
TIF11YMR260C YNR073CP0CX09 502 aa1.28□□□□□ -2.2
TIF11YMR260C MATALPHA2P0CY08 210 aa1.28□□□□□ -2.2
TIF11YMR260C HMLALPHA2P0CY09 210 aa1.28□□□□□ -2.2
TIF11YMR260C CBF1P17106 351 aa1.28□□□□□ -2.2
TIF11YMR260C MSA2P36157 363 aa1.28□□□□□ -2.2
TIF11YMR260C FIS1P40515 155 aa1.28□□□□□ -2.2
TIF11YMR260C ARC15P40518 154 aaRIP-Chip data1.28□□□□□ -2.2not detected
TIF11YMR260C CAT5P41735 233 aa1.28□□□□□ -2.2
TIF11YMR260C GON7P46984 123 aa1.28□□□□□ -2.2
TIF11YMR260C IRC18P47056 224 aa1.28□□□□□ -2.2
TIF11YMR260C BXI1P48558 297 aa1.28□□□□□ -2.2
TIF11YMR260C CWC23P52868 283 aaPredicted RBP1.28□□□□□ -2.2
TIF11YMR260C ALG13P53178 202 aa1.28□□□□□ -2.2
TIF11YMR260C RPL26BP53221 127 aaKnown RBP1.28□□□□□ -2.2
TIF11YMR260C GTR2P53290 341 aa1.28□□□□□ -2.2
TIF11YMR260C CUS2P53830 285 aaPredicted RBP1.28□□□□□ -2.2
TIF11YMR260C ABF2Q02486 183 aa1.28□□□□□ -2.2
TIF11YMR260C YML096WQ04489 525 aa1.28□□□□□ -2.2
TIF11YMR260C YPR172WQ06608 200 aa1.28□□□□□ -2.2
TIF11YMR260C AGC1Q12482 902 aa1.28□□□□□ -2.2
TIF11YMR260C LSO2Q3E772 92 aaKnown RBP1.28□□□□□ -2.2
TIF11YMR260C YOR020W-AQ3E824 90 aa1.28□□□□□ -2.2
TIF11YMR260C SAC3P46674 1301 aa1.27□□□□□ -2.21
TIF11YMR260C YDR157WA0A023PZE8 133 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms