RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUS1	YMR240C	THP2	O13539	261 aa	Known RBP	3.17	□□□□□ -1.9
CUS1	YMR240C	RAD10	P06838	210 aa		3.17	□□□□□ -1.9
CUS1	YMR240C	RPL27A	P0C2H6	136 aa	Known RBP	3.17	□□□□□ -1.9
CUS1	YMR240C	RPL27B	P0C2H7	136 aa	Known RBP	3.17	□□□□□ -1.9
CUS1	YMR240C	KRE1	P17260	313 aa		3.17	□□□□□ -1.9
CUS1	YMR240C	STE18	P18852	110 aa		3.17	□□□□□ -1.9
CUS1	YMR240C	YER084W	P40057	128 aa		3.17	□□□□□ -1.9
CUS1	YMR240C	COX15	P40086	486 aa		3.17	□□□□□ -1.9
CUS1	YMR240C	PRE6	P40303	254 aa	Known RBP	3.17	□□□□□ -1.9
CUS1	YMR240C	YJL144W	P47009	104 aa		3.17	□□□□□ -1.9
CUS1	YMR240C	CUS2	P53830	285 aa	Predicted RBP	3.17	□□□□□ -1.9
CUS1	YMR240C	DCR2	Q05924	578 aa		3.17	□□□□□ -1.9
CUS1	YMR240C	YOR268C	Q08734	132 aa		3.17	□□□□□ -1.9
CUS1	YMR240C	YRA1	Q12159	226 aa	Known RBP	3.17	□□□□□ -1.9
CUS1	YMR240C	GEP5	Q12393	293 aa		3.17	□□□□□ -1.9
CUS1	YMR240C	SNA3	P14359	133 aa		3.16	□□□□□ -1.9
CUS1	YMR240C	ERD2	P18414	219 aa		3.16	□□□□□ -1.9
CUS1	YMR240C	SDH4	P37298	181 aa		3.16	□□□□□ -1.9
CUS1	YMR240C	YMR144W	P40214	342 aa	Known RBP	3.16	□□□□□ -1.9
CUS1	YMR240C	YRB1	P41920	201 aa	Known RBP	3.16	□□□□□ -1.9
CUS1	YMR240C	MCM22	P47167	239 aa		3.16	□□□□□ -1.9
CUS1	YMR240C	YJR141W	P47172	347 aa	Predicted RBP	3.16	□□□□□ -1.9
CUS1	YMR240C	YMR114C	Q04471	368 aa	Known RBP	3.16	□□□□□ -1.9
CUS1	YMR240C	YLR462W	O13556	202 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	YPR096C	O13587	100 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	BCY1	P07278	416 aa	Known RBP	3.15	□□□□□ -1.91
CUS1	YMR240C	SGA1	P08019	549 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	MATALPHA2	P0CY08	210 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	HMLALPHA2	P0CY09	210 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	SEC22	P22214	214 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	CDC10	P25342	322 aa	Known RBP	3.15	□□□□□ -1.91
CUS1	YMR240C	MIG1	P27705	504 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	NTF2	P33331	125 aa	Known RBP	3.15	□□□□□ -1.91
CUS1	YMR240C	PRP18	P33411	251 aa	Predicted RBP	3.15	□□□□□ -1.91
CUS1	YMR240C	VPS51	P36116	164 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	MIC12	P38341	106 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	YEL075C	P39972	122 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	YNL247W	P53852	767 aa	Known RBP	3.15	□□□□□ -1.91
CUS1	YMR240C	GIM5	Q04493	163 aa		3.15	□□□□□ -1.91
CUS1	YMR240C	SWI1	P09547	1314 aa		3.14	□□□□□ -1.91
CUS1	YMR240C	SPT3	P06844	337 aa		3.14	□□□□□ -1.91
CUS1	YMR240C	CDC33	P07260	213 aa	Known RBP	3.14	□□□□□ -1.91
CUS1	YMR240C	YMR31	P19955	123 aa		3.14	□□□□□ -1.91
CUS1	YMR240C	RIB1	P38066	345 aa		3.14	□□□□□ -1.91
CUS1	YMR240C	URA8	P38627	578 aa	Predicted RBP	3.14	□□□□□ -1.91
CUS1	YMR240C	EGD2	P38879	174 aa	Known RBP	3.14	□□□□□ -1.91
CUS1	YMR240C	PIR5	P46999	287 aa		3.14	□□□□□ -1.91
CUS1	YMR240C	YJR149W	P47177	404 aa		3.14	□□□□□ -1.91
CUS1	YMR240C	MIC26	P50087	233 aa		3.14	□□□□□ -1.91
CUS1	YMR240C	RMR1	P53060	241 aa		3.14	□□□□□ -1.91
CUS1	YMR240C	YLR179C	Q06252	201 aa	Known RBP	3.14	□□□□□ -1.91
CUS1	YMR240C	RAD9	P14737	1309 aa		3.13	□□□□□ -1.91
CUS1	YMR240C	YBR121C-A	P0C5L4	52 aa		3.13	□□□□□ -1.91
CUS1	YMR240C	CBF1	P17106	351 aa		3.13	□□□□□ -1.91
CUS1	YMR240C	ATP7	P30902	174 aa		3.13	□□□□□ -1.91
CUS1	YMR240C	SSO1	P32867	290 aa		3.13	□□□□□ -1.91
CUS1	YMR240C	CBT1	P36038	271 aa	Predicted RBP	3.13	□□□□□ -1.91
CUS1	YMR240C	RTC3	P38804	111 aa	Predicted RBP	3.13	□□□□□ -1.91
CUS1	YMR240C	SEC72	P39742	193 aa	Known RBP	3.13	□□□□□ -1.91
CUS1	YMR240C	TRM9	P49957	279 aa		3.13	□□□□□ -1.91
CUS1	YMR240C	SYF2	P53277	215 aa	Predicted RBP	3.13	□□□□□ -1.91
CUS1	YMR240C	FAR8	Q05040	523 aa		3.13	□□□□□ -1.91
CUS1	YMR240C	YPL229W	Q99395	206 aa		3.13	□□□□□ -1.91
CUS1	YMR240C	DPM1	P14020	267 aa	Known RBP	3.12	□□□□□ -1.91
CUS1	YMR240C	RCN1	P36054	211 aa		3.12	□□□□□ -1.91
CUS1	YMR240C	COS8	P38723	381 aa		3.12	□□□□□ -1.91
CUS1	YMR240C	YIL001W	P40560	513 aa		3.12	□□□□□ -1.91
CUS1	YMR240C	GON7	P46984	123 aa		3.12	□□□□□ -1.91
CUS1	YMR240C	NSA1	P53136	463 aa	Predicted RBP	3.12	□□□□□ -1.91
CUS1	YMR240C	APJ1	P53940	528 aa		3.12	□□□□□ -1.91
CUS1	YMR240C	RSM10	Q03201	203 aa		3.12	□□□□□ -1.91
CUS1	YMR240C	FUS2	Q05670	677 aa		3.12	□□□□□ -1.91
CUS1	YMR240C	CDC123	Q05791	360 aa		3.12	□□□□□ -1.91
CUS1	YMR240C	ABP140	Q08641	628 aa	Known RBP	3.12	□□□□□ -1.91
CUS1	YMR240C	YKL183C-A	Q3E765	70 aa		3.12	□□□□□ -1.91
CUS1	YMR240C	TIF34	P40217	347 aa	Known RBP	3.11	□□□□□ -1.91
CUS1	YMR240C	OST2	P46964	130 aa		3.11	□□□□□ -1.91
CUS1	YMR240C	YGL159W	P53110	370 aa		3.11	□□□□□ -1.91
CUS1	YMR240C	TOS8	P53147	276 aa		3.11	□□□□□ -1.91
CUS1	YMR240C	INM2	Q05533	292 aa		3.11	□□□□□ -1.91
CUS1	YMR240C	TPO4	Q12256	659 aa		3.11	□□□□□ -1.91
CUS1	YMR240C	APA2	P22108	325 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
CUS1	YMR240C	YKR032W	P36127	104 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	YGP1	P38616	354 aa	Known RBP	3.1	□□□□□ -1.91
CUS1	YMR240C	MTW1	P39731	289 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	ERG28	P40030	148 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	COG3	P40094	801 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	ILM1	P47155	203 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	DIA1	P54005	336 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	YLR030W	Q07967	263 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	HRT1	Q08273	121 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	MSA1	Q08471	629 aa		3.1	□□□□□ -1.91
CUS1	YMR240C	SPA2	P23201	1466 aa	Known RBP	3.09	□□□□□ -1.91
CUS1	YMR240C	IPP1	P00817	287 aa	Known RBP	3.09	□□□□□ -1.91
CUS1	YMR240C	ERG24	P32462	438 aa	Known RBP	3.09	□□□□□ -1.91
CUS1	YMR240C	MSA2	P36157	363 aa		3.09	□□□□□ -1.91
CUS1	YMR240C	TRM5	P38793	499 aa		3.09	□□□□□ -1.91
CUS1	YMR240C	YJL016W	P47072	561 aa		3.09	□□□□□ -1.91
CUS1	YMR240C	GET1	P53192	235 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms