RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W ACH1P32316 526 aa12.87□□□□□ -0.35
SCJ1YMR214W OST1P41543 476 aaKnown RBP12.87□□□□□ -0.35
SCJ1YMR214W YHC3P47040 408 aa12.87□□□□□ -0.35
SCJ1YMR214W AVT4P50944 713 aa12.87□□□□□ -0.35
SCJ1YMR214W UTP15Q04305 513 aaKnown RBP12.87□□□□□ -0.35
SCJ1YMR214W HUT1Q12520 339 aa12.87□□□□□ -0.35
SCJ1YMR214W DEG1P31115 442 aaKnown RBP12.86□□□□□ -0.35
SCJ1YMR214W MCH2P36032 473 aa12.86□□□□□ -0.35
SCJ1YMR214W TCM62P38228 572 aaKnown RBP12.86□□□□□ -0.35
SCJ1YMR214W MRPL13Q02204 264 aa12.86□□□□□ -0.35
SCJ1YMR214W YPL077CQ02831 240 aa12.86□□□□□ -0.35
SCJ1YMR214W TY1A-DR2Q03964 440 aaKnown RBP12.86□□□□□ -0.35
SCJ1YMR214W YCP4P25349 247 aaKnown RBP12.85□□□□□ -0.35
SCJ1YMR214W ATG22P25568 528 aa12.85□□□□□ -0.35
SCJ1YMR214W GLC7P32598 312 aaKnown RBP12.85□□□□□ -0.35
SCJ1YMR214W YBL010CP32788 280 aa12.85□□□□□ -0.35
SCJ1YMR214W YBR242WP38331 238 aa12.85□□□□□ -0.35
SCJ1YMR214W YIP5P53108 310 aa12.85□□□□□ -0.35
SCJ1YMR214W PRM15Q03262 622 aa12.85□□□□□ -0.35
SCJ1YMR214W YLR031WQ07978 186 aa12.85□□□□□ -0.35
SCJ1YMR214W ERP4Q12450 207 aa12.85□□□□□ -0.35
SCJ1YMR214W SPS2P08459 502 aa12.84□□□□□ -0.35
SCJ1YMR214W BUD23P25627 275 aaPredicted RBP12.84□□□□□ -0.35
SCJ1YMR214W AGA2P32781 87 aa12.84□□□□□ -0.35
SCJ1YMR214W MRPL36P36531 177 aa12.84□□□□□ -0.35
SCJ1YMR214W ARC40P38328 384 aaKnown RBP12.84□□□□□ -0.35
SCJ1YMR214W AIM25P47140 327 aa12.84□□□□□ -0.35
SCJ1YMR214W HNT1Q04344 158 aaKnown RBP12.84□□□□□ -0.35
SCJ1YMR214W MRX9Q07349 420 aaKnown RBP12.84□□□□□ -0.35
SCJ1YMR214W RFU1Q08003 200 aa12.84□□□□□ -0.35
SCJ1YMR214W USB1Q12208 290 aaKnown RBP12.84□□□□□ -0.35
SCJ1YMR214W FRE8Q12209 686 aa12.84□□□□□ -0.35
SCJ1YMR214W URA6P15700 204 aa12.83□□□□□ -0.36
SCJ1YMR214W SAG1P20840 650 aa12.83□□□□□ -0.36
SCJ1YMR214W VMA5P31412 392 aaKnown RBP12.83□□□□□ -0.36
SCJ1YMR214W REC114P32841 428 aa12.83□□□□□ -0.36
SCJ1YMR214W RIM9Q04734 239 aa12.83□□□□□ -0.36
SCJ1YMR214W RRS1Q08746 203 aaKnown RBP12.83□□□□□ -0.36
SCJ1YMR214W VAM7P32912 316 aa12.82□□□□□ -0.36
SCJ1YMR214W YKL063CP35725 167 aa12.82□□□□□ -0.36
SCJ1YMR214W BOL3P39724 118 aa12.82□□□□□ -0.36
SCJ1YMR214W MID1P41821 548 aa12.82□□□□□ -0.36
SCJ1YMR214W DIE2P50076 525 aa12.82□□□□□ -0.36
SCJ1YMR214W TYW3P53177 273 aa12.82□□□□□ -0.36
SCJ1YMR214W GMC1Q04399 608 aa12.82□□□□□ -0.36
SCJ1YMR214W SPR28Q04921 423 aa12.82□□□□□ -0.36
SCJ1YMR214W TDH2P00358 332 aaKnown RBP12.81□□□□□ -0.36
SCJ1YMR214W GCD1P09032 578 aaPredicted RBP12.81□□□□□ -0.36
SCJ1YMR214W SHM2P37291 469 aaKnown RBP12.81□□□□□ -0.36
SCJ1YMR214W MRPS16Q02608 121 aa12.81□□□□□ -0.36
SCJ1YMR214W REP2P03872 296 aa12.8□□□□□ -0.36
SCJ1YMR214W RAD52P06778 471 aaKnown RBP12.8□□□□□ -0.36
SCJ1YMR214W UFD1P53044 361 aa12.8□□□□□ -0.36
SCJ1YMR214W PEF1P53238 335 aa12.8□□□□□ -0.36
SCJ1YMR214W YMR279CQ03263 540 aa12.8□□□□□ -0.36
SCJ1YMR214W DLT1Q04216 342 aa12.8□□□□□ -0.36
SCJ1YMR214W GAT3Q07928 141 aa12.8□□□□□ -0.36
SCJ1YMR214W CDC28P00546 298 aaKnown RBP12.79□□□□□ -0.36
SCJ1YMR214W CDC23P16522 626 aa12.79□□□□□ -0.36
SCJ1YMR214W MSS1P32559 526 aaPredicted RBP12.79□□□□□ -0.36
SCJ1YMR214W FIG1P38224 298 aa12.79□□□□□ -0.36
SCJ1YMR214W GLR1P41921 483 aaKnown RBP12.79□□□□□ -0.36
SCJ1YMR214W YNL046WP53956 172 aa12.79□□□□□ -0.36
SCJ1YMR214W PIN3Q06449 215 aa12.79□□□□□ -0.36
SCJ1YMR214W SNA4Q07549 140 aa12.79□□□□□ -0.36
SCJ1YMR214W MET3P08536 511 aa12.78□□□□□ -0.36
SCJ1YMR214W GRX2P17695 143 aaKnown RBP12.78□□□□□ -0.36
SCJ1YMR214W HNM1P19807 563 aa12.78□□□□□ -0.36
SCJ1YMR214W RNA14P25298 677 aaKnown RBP12.78□□□□□ -0.36
SCJ1YMR214W FMT1P32785 401 aa12.78□□□□□ -0.36
SCJ1YMR214W VMA11P32842 164 aa12.78□□□□□ -0.36
SCJ1YMR214W PPQ1P32945 549 aa12.78□□□□□ -0.36
SCJ1YMR214W MRPL3P36516 390 aa12.78□□□□□ -0.36
SCJ1YMR214W YER079WP40052 210 aaKnown RBP12.78□□□□□ -0.36
SCJ1YMR214W SSN8P47821 323 aa12.78□□□□□ -0.36
SCJ1YMR214W YPR098CQ06089 161 aa12.78□□□□□ -0.36
SCJ1YMR214W YLL053CP0CD98 152 aa12.77□□□□□ -0.37
SCJ1YMR214W RFA1P22336 621 aaKnown RBP12.77□□□□□ -0.37
SCJ1YMR214W PEX4P29340 183 aa12.77□□□□□ -0.37
SCJ1YMR214W MRPL27P36526 146 aaPredicted RBP12.77□□□□□ -0.37
SCJ1YMR214W ARG5,6Q01217 863 aa12.77□□□□□ -0.37
SCJ1YMR214W YPR196WQ06595 470 aa12.77□□□□□ -0.37
SCJ1YMR214W YOR385WQ08909 290 aa12.77□□□□□ -0.37
SCJ1YMR214W SCM3Q12334 223 aa12.77□□□□□ -0.37
SCJ1YMR214W NHP6BP11633 99 aaKnown RBP12.76□□□□□ -0.37
SCJ1YMR214W RFA3P26755 122 aaKnown RBP12.76□□□□□ -0.37
SCJ1YMR214W ARO9P38840 513 aaPredicted RBP12.76□□□□□ -0.37
SCJ1YMR214W GWT1P47026 490 aa12.76□□□□□ -0.37
SCJ1YMR214W RDI1Q12434 202 aa12.76□□□□□ -0.37
SCJ1YMR214W AAC1P04710 309 aa12.75□□□□□ -0.37
SCJ1YMR214W GCN3P14741 305 aa12.75□□□□□ -0.37
SCJ1YMR214W SKP1P52286 194 aa12.75□□□□□ -0.37
SCJ1YMR214W RSM27P53305 110 aa12.75□□□□□ -0.37
SCJ1YMR214W YDC1Q02896 317 aa12.75□□□□□ -0.37
SCJ1YMR214W YOR186WQ08560 144 aa12.75□□□□□ -0.37
SCJ1YMR214W MPD1Q12404 318 aaKnown RBP12.75□□□□□ -0.37
SCJ1YMR214W YCL048W-AQ2V2Q2 79 aa12.75□□□□□ -0.37
SCJ1YMR214W RPL6BP05739 176 aaKnown RBP12.74□□□□□ -0.37
SCJ1YMR214W RPS31P05759 152 aaKnown RBP12.74□□□□□ -0.37
SCJ1YMR214W FAT1P38225 669 aa12.74□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms