RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	YJL028W	P47062	111 aa		0.86	□□□□□ -2.27
UBC7	YMR022W	ARP5	P53946	755 aa		0.86	□□□□□ -2.27
UBC7	YMR022W	VPS20	Q04272	221 aa		0.86	□□□□□ -2.27
UBC7	YMR022W	SEC10	Q06245	871 aa		0.86	□□□□□ -2.27
UBC7	YMR022W	YRA1	Q12159	226 aa	Known RBP	0.86	□□□□□ -2.27
UBC7	YMR022W	DCN1	Q12395	269 aa		0.86	□□□□□ -2.27
UBC7	YMR022W	HKR1	P41809	1802 aa		0.86	□□□□□ -2.27
UBC7	YMR022W	RPS3	P05750	240 aa	Known RBP	0.85	□□□□□ -2.27
UBC7	YMR022W	RPL4A	P10664	362 aa	Known RBP	0.85	□□□□□ -2.27
UBC7	YMR022W	MDH2	P22133	377 aa		0.85	□□□□□ -2.27
UBC7	YMR022W	RPC25	P35718	212 aa		0.85	□□□□□ -2.27
UBC7	YMR022W	AGP3	P43548	558 aa		0.85	□□□□□ -2.27
UBC7	YMR022W	OST2	P46964	130 aa		0.85	□□□□□ -2.27
UBC7	YMR022W	RPL4B	P49626	362 aa	Known RBP	0.85	□□□□□ -2.27
UBC7	YMR022W	CPD1	P53314	239 aa		0.85	□□□□□ -2.27
UBC7	YMR022W	YMR111C	Q04461	462 aa	Predicted RBP	0.85	□□□□□ -2.27
UBC7	YMR022W	MYO1	P08964	1928 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	PPH21	P23594	369 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	PEX4	P29340	183 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	SSH1	P38353	490 aa	Known RBP	0.84	□□□□□ -2.27
UBC7	YMR022W	HIS2	P38635	335 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	YER135C	P40082	130 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	PRM10	P42946	383 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	CIS3	P47001	227 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	MDM34	P53083	459 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	YNR062C	P53748	327 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	SDC1	Q03323	175 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	YOS9	Q99220	542 aa		0.84	□□□□□ -2.27
UBC7	YMR022W	ADE6	P38972	1358 aa	Known RBP	0.83	□□□□□ -2.28
UBC7	YMR022W	IPP1	P00817	287 aa	Known RBP	0.83	□□□□□ -2.28
UBC7	YMR022W	VMA2	P16140	517 aa	Known RBP	0.83	□□□□□ -2.28
UBC7	YMR022W	CSM1	P25651	190 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	SWI3	P32591	825 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	PRM9	P39551	298 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	BMT5	P40493	336 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	IBA57	P47158	497 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	RIB4	P50861	169 aa	Predicted RBP	0.83	□□□□□ -2.28
UBC7	YMR022W	PEX31	P53203	462 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	YGR026W	P53217	278 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	CTF19	Q02732	369 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	MGR3	Q04472	501 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	ATO3	Q12359	275 aa		0.83	□□□□□ -2.28
UBC7	YMR022W	GCD2	P12754	651 aa	Predicted RBP	0.82	□□□□□ -2.28
UBC7	YMR022W	COS8	P38723	381 aa		0.82	□□□□□ -2.28
UBC7	YMR022W	MOB1	P40484	314 aa		0.82	□□□□□ -2.28
UBC7	YMR022W	ARC15	P40518	154 aa	RIP-Chip data	0.82	□□□□□ -2.28	not detected
UBC7	YMR022W	CDC40	P40968	455 aa	Predicted RBP	0.82	□□□□□ -2.28
UBC7	YMR022W	AAH1	P53909	347 aa		0.82	□□□□□ -2.28
UBC7	YMR022W	PEX10	Q05568	337 aa		0.82	□□□□□ -2.28
UBC7	YMR022W	RPS24A	P0CX31	135 aa	Known RBP	0.81	□□□□□ -2.28
UBC7	YMR022W	RPS24B	P0CX32	135 aa	Known RBP	0.81	□□□□□ -2.28
UBC7	YMR022W	YGL010W	P25338	174 aa		0.81	□□□□□ -2.28
UBC7	YMR022W	DBP6	P53734	629 aa	Known RBP	0.81	□□□□□ -2.28
UBC7	YMR022W	YNL050C	P53952	270 aa		0.81	□□□□□ -2.28
UBC7	YMR022W	RRG8	Q06109	277 aa		0.81	□□□□□ -2.28
UBC7	YMR022W	SFH1	Q06168	426 aa		0.81	□□□□□ -2.28
UBC7	YMR022W	MOT1	P32333	1867 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	FPR1	P20081	114 aa	Known RBP	0.8	□□□□□ -2.28
UBC7	YMR022W	SCL1	P21243	252 aa	Known RBP	0.8	□□□□□ -2.28
UBC7	YMR022W	GPI12	P23797	304 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	RCN1	P36054	211 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
UBC7	YMR022W	RTR1	P40084	226 aa	Predicted RBP	0.8	□□□□□ -2.28
UBC7	YMR022W	NAS2	P40555	220 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	BUD25	P85052	153 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	NUP49	Q02199	472 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	YMR279C	Q03263	540 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	ATC1	Q04005	294 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	VAC14	Q06708	880 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
UBC7	YMR022W	AI5_BETA	Q9ZZX0	354 aa		0.8	□□□□□ -2.28
UBC7	YMR022W	DSF1	P0CX08	502 aa		0.79	□□□□□ -2.28
UBC7	YMR022W	YNR073C	P0CX09	502 aa		0.79	□□□□□ -2.28
UBC7	YMR022W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
UBC7	YMR022W	VMA11	P32842	164 aa		0.79	□□□□□ -2.28
UBC7	YMR022W	BLI1	P35727	113 aa		0.79	□□□□□ -2.28
UBC7	YMR022W	ECM13	P38195	257 aa		0.79	□□□□□ -2.28
UBC7	YMR022W	MNN9	P39107	395 aa	Known RBP	0.79	□□□□□ -2.28
UBC7	YMR022W	ERV29	P53337	310 aa		0.79	□□□□□ -2.28
UBC7	YMR022W	MRPS8	Q03799	155 aa		0.79	□□□□□ -2.28
UBC7	YMR022W	TRX1	P22217	103 aa	Known RBP	0.78	□□□□□ -2.28
UBC7	YMR022W	PHO88	P38264	188 aa	Predicted RBP	0.78	□□□□□ -2.28
UBC7	YMR022W	YBR219C	P38317	127 aa		0.78	□□□□□ -2.28
UBC7	YMR022W	DOG1	P38774	246 aa		0.78	□□□□□ -2.28
UBC7	YMR022W	MRX5	P47007	382 aa		0.78	□□□□□ -2.28
UBC7	YMR022W	YGR219W	P53307	113 aa		0.78	□□□□□ -2.28
UBC7	YMR022W	EMI1	Q04406	187 aa		0.78	□□□□□ -2.28
UBC7	YMR022W	BCP1	Q06338	283 aa		0.78	□□□□□ -2.28
UBC7	YMR022W	BBP1	Q12365	385 aa		0.78	□□□□□ -2.28
UBC7	YMR022W	YIL046W-A	Q3E7Z4	54 aa		0.78	□□□□□ -2.28
UBC7	YMR022W	YBL008W-A	Q3E821	79 aa		0.78	□□□□□ -2.28
UBC7	YMR022W	YLR422W	Q06409	1932 aa		0.77	□□□□□ -2.29
UBC7	YMR022W	YBR220C	P38318	560 aa		0.77	□□□□□ -2.29
UBC7	YMR022W	YHR022C	P38763	256 aa		0.77	□□□□□ -2.29
UBC7	YMR022W	TVP23	P38962	199 aa		0.77	□□□□□ -2.29
UBC7	YMR022W	CYT2	Q00873	224 aa		0.77	□□□□□ -2.29
UBC7	YMR022W	AKR2	Q12013	749 aa		0.77	□□□□□ -2.29
UBC7	YMR022W	Q0255	P03881	472 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	RPL9A	P05738	191 aa	Known RBP	0.76	□□□□□ -2.29
UBC7	YMR022W	YHR032W-A	P0C5N6	59 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms