RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C MSW1P04803 379 aa2.25□□□□□ -2.05
PRE8YML092C ILV5P06168 395 aaKnown RBP2.25□□□□□ -2.05
PRE8YML092C MRPS28P21771 286 aa2.25□□□□□ -2.05
PRE8YML092C MEK1P24719 497 aaPredicted RBP2.25□□□□□ -2.05
PRE8YML092C KRR1P25586 316 aaPredicted RBP2.25□□□□□ -2.05
PRE8YML092C PEX3P28795 441 aa2.25□□□□□ -2.05
PRE8YML092C YME2P32843 850 aa2.25□□□□□ -2.05
PRE8YML092C SUR1P33300 382 aa2.25□□□□□ -2.05
PRE8YML092C PEX32P38292 413 aa2.25□□□□□ -2.05
PRE8YML092C SDS24P38314 527 aa2.25□□□□□ -2.05
PRE8YML092C GON7P46984 123 aa2.25□□□□□ -2.05
PRE8YML092C YGL101WP53144 215 aa2.25□□□□□ -2.05
PRE8YML092C HHT1P61830 136 aa2.25□□□□□ -2.05
PRE8YML092C GTR1Q00582 310 aa2.25□□□□□ -2.05
PRE8YML092C MRPL51Q06090 140 aaPredicted RBP2.25□□□□□ -2.05
PRE8YML092C PSR1Q07800 427 aa2.25□□□□□ -2.05
PRE8YML092C TDH2P00358 332 aaKnown RBP2.24□□□□□ -2.05
PRE8YML092C TDH3P00359 332 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
PRE8YML092C MES1P00958 751 aaKnown RBP2.24□□□□□ -2.05
PRE8YML092C CMK2P22517 447 aa2.24□□□□□ -2.05
PRE8YML092C VMA16P23968 213 aa2.24□□□□□ -2.05
PRE8YML092C ATP7P30902 174 aa2.24□□□□□ -2.05
PRE8YML092C NTG1P31378 399 aa2.24□□□□□ -2.05
PRE8YML092C ASF2P32448 525 aaPredicted RBP2.24□□□□□ -2.05
PRE8YML092C REC114P32841 428 aa2.24□□□□□ -2.05
PRE8YML092C SRP102P36057 244 aaPredicted RBP2.24□□□□□ -2.05
PRE8YML092C SKG1P36169 355 aa2.24□□□□□ -2.05
PRE8YML092C TRM5P38793 499 aa2.24□□□□□ -2.05
PRE8YML092C UIP3P39547 235 aa2.24□□□□□ -2.05
PRE8YML092C MDE1P47095 244 aa2.24□□□□□ -2.05
PRE8YML092C SVL3Q03088 825 aaKnown RBP2.24□□□□□ -2.05
PRE8YML092C GPI17Q04080 534 aa2.24□□□□□ -2.05
PRE8YML092C YPR098CQ06089 161 aa2.24□□□□□ -2.05
PRE8YML092C RRP9Q06506 573 aaKnown RBP2.24□□□□□ -2.05
PRE8YML092C ASA1Q06822 443 aa2.24□□□□□ -2.05
PRE8YML092C GRC3Q07845 632 aa2.24□□□□□ -2.05
PRE8YML092C GDH1P07262 454 aaKnown RBP2.23□□□□□ -2.05
PRE8YML092C SNF6P18888 332 aa2.23□□□□□ -2.05
PRE8YML092C SAG1P20840 650 aa2.23□□□□□ -2.05
PRE8YML092C FUN19P28003 413 aaPredicted RBP2.23□□□□□ -2.05
PRE8YML092C SUA7P29055 345 aaPredicted RBP2.23□□□□□ -2.05
PRE8YML092C MRP20P32387 263 aa2.23□□□□□ -2.05
PRE8YML092C AUA1P32450 94 aa2.23□□□□□ -2.05
PRE8YML092C VPS17P32913 551 aa2.23□□□□□ -2.05
PRE8YML092C SPC34P36131 295 aa2.23□□□□□ -2.05
PRE8YML092C ADH5P38113 351 aaKnown RBP2.23□□□□□ -2.05
PRE8YML092C RPA43P46669 326 aa2.23□□□□□ -2.05
PRE8YML092C PIR5P46999 287 aa2.23□□□□□ -2.05
PRE8YML092C SFH5P47008 294 aa2.23□□□□□ -2.05
PRE8YML092C BNA1P47096 177 aa2.23□□□□□ -2.05
PRE8YML092C GPI8P49018 411 aa2.23□□□□□ -2.05
PRE8YML092C PHB2P50085 310 aa2.23□□□□□ -2.05
PRE8YML092C YGL114WP53134 725 aa2.23□□□□□ -2.05
PRE8YML092C GET1P53192 235 aa2.23□□□□□ -2.05
PRE8YML092C YGR168CP53293 376 aa2.23□□□□□ -2.05
PRE8YML092C GPI1P53306 609 aa2.23□□□□□ -2.05
PRE8YML092C YMR102CQ03177 834 aa2.23□□□□□ -2.05
PRE8YML092C PEX12Q04370 399 aa2.23□□□□□ -2.05
PRE8YML092C YOR289WQ12012 251 aaPredicted RBP2.23□□□□□ -2.05
PRE8YML092C FCY1Q12178 158 aa2.23□□□□□ -2.05
PRE8YML092C YLR126CQ12288 251 aa2.23□□□□□ -2.05
PRE8YML092C ISA2Q12425 185 aa2.23□□□□□ -2.05
PRE8YML092C SGA1P08019 549 aa2.22□□□□□ -2.05
PRE8YML092C MRS3P10566 314 aa2.22□□□□□ -2.05
PRE8YML092C RPL30P14120 105 aaKnown RBP2.22□□□□□ -2.05
PRE8YML092C HXT2P23585 541 aa2.22□□□□□ -2.05
PRE8YML092C RRP7P25368 297 aaPredicted RBP2.22□□□□□ -2.05
PRE8YML092C RPL5P26321 297 aaKnown RBP2.22□□□□□ -2.05
PRE8YML092C DOA4P32571 926 aa2.22□□□□□ -2.05
PRE8YML092C FRM2P37261 193 aa2.22□□□□□ -2.05
PRE8YML092C RPS20P38701 121 aaKnown RBP2.22□□□□□ -2.05
PRE8YML092C LAG1P38703 411 aa2.22□□□□□ -2.05
PRE8YML092C CHL4P38907 458 aa2.22□□□□□ -2.05
PRE8YML092C TIR3P40552 269 aa2.22□□□□□ -2.05
PRE8YML092C CIN2P46670 268 aa2.22□□□□□ -2.05
PRE8YML092C TRS85P46944 698 aa2.22□□□□□ -2.05
PRE8YML092C YJL016WP47072 561 aa2.22□□□□□ -2.05
PRE8YML092C AVT4P50944 713 aa2.22□□□□□ -2.05
PRE8YML092C MIG2P53035 382 aa2.22□□□□□ -2.05
PRE8YML092C PGA1P53896 198 aa2.22□□□□□ -2.05
PRE8YML092C SUB1P54000 292 aaKnown RBP2.22□□□□□ -2.05
PRE8YML092C ABZ2Q03266 374 aa2.22□□□□□ -2.05
PRE8YML092C DIG2Q03373 323 aaKnown RBP2.22□□□□□ -2.05
PRE8YML092C OST6Q03723 332 aa2.22□□□□□ -2.05
PRE8YML092C YDR248CQ03786 193 aa2.22□□□□□ -2.05
PRE8YML092C DPB4Q04603 196 aaKnown RBP2.22□□□□□ -2.05
PRE8YML092C ELP6Q04868 273 aa2.22□□□□□ -2.05
PRE8YML092C ARR2Q06597 130 aa2.22□□□□□ -2.05
PRE8YML092C SNX3Q08826 162 aaKnown RBP2.22□□□□□ -2.05
PRE8YML092C THP3Q12049 470 aaKnown RBP2.22□□□□□ -2.05
PRE8YML092C YHR212W-AP0CX91 67 aa2.21□□□□□ -2.06
PRE8YML092C ATP10P18496 279 aa2.21□□□□□ -2.06
PRE8YML092C TOM40P23644 387 aaKnown RBP2.21□□□□□ -2.06
PRE8YML092C PUT3P25502 979 aaPredicted RBP2.21□□□□□ -2.06
PRE8YML092C AGA1P32323 725 aa2.21□□□□□ -2.06
PRE8YML092C NDC1P32500 655 aa2.21□□□□□ -2.06
PRE8YML092C YRA2P36036 203 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
PRE8YML092C ANR2P36090 516 aaPredicted RBP2.21□□□□□ -2.06
PRE8YML092C FZO1P38297 855 aa2.21□□□□□ -2.06
PRE8YML092C YER079WP40052 210 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms