RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W MIX17Q03667 156 aa2.13□□□□□ -2.07
CST9YLR394W COX20Q04935 205 aa2.13□□□□□ -2.07
CST9YLR394W RPL4AP10664 362 aaKnown RBP2.12□□□□□ -2.07
CST9YLR394W CAM1P29547 415 aaKnown RBP2.12□□□□□ -2.07
CST9YLR394W MED6P38782 295 aa2.12□□□□□ -2.07
CST9YLR394W YAR1P46683 200 aa2.12□□□□□ -2.07
CST9YLR394W RPL4BP49626 362 aaKnown RBP2.12□□□□□ -2.07
CST9YLR394W MAL13P53338 473 aa2.12□□□□□ -2.07
CST9YLR394W OST6Q03723 332 aa2.12□□□□□ -2.07
CST9YLR394W PER33Q12144 273 aa2.12□□□□□ -2.07
CST9YLR394W EHD3P28817 500 aa2.11□□□□□ -2.07
CST9YLR394W COY1P34237 679 aa2.11□□□□□ -2.07
CST9YLR394W CAB3P36076 571 aa2.11□□□□□ -2.07
CST9YLR394W TVP38P36164 337 aa2.11□□□□□ -2.07
CST9YLR394W MOB1P40484 314 aa2.11□□□□□ -2.07
CST9YLR394W RSM27P53305 110 aa2.11□□□□□ -2.07
CST9YLR394W SSU72P53538 206 aaPredicted RBP2.11□□□□□ -2.07
CST9YLR394W MYO5Q04439 1219 aaKnown RBP2.11□□□□□ -2.07
CST9YLR394W KAP95Q06142 861 aaKnown RBP2.11□□□□□ -2.07
CST9YLR394W YOR268CQ08734 132 aa2.11□□□□□ -2.07
CST9YLR394W SME1Q12330 94 aaPredicted RBP2.11□□□□□ -2.07
CST9YLR394W PRP8P33334 2413 aaKnown RBP2.11□□□□□ -2.07
CST9YLR394W YHL026CP38740 315 aa2.1□□□□□ -2.07
CST9YLR394W YHI9P38765 294 aa2.1□□□□□ -2.07
CST9YLR394W TAD2P47058 250 aa2.1□□□□□ -2.07
CST9YLR394W EMC2P47133 292 aaKnown RBP2.1□□□□□ -2.07
CST9YLR394W CTR3Q06686 241 aa2.1□□□□□ -2.07
CST9YLR394W YPL247CQ12523 523 aa2.1□□□□□ -2.07
CST9YLR394W MSB2P32334 1306 aa2.1□□□□□ -2.07
CST9YLR394W MAK31P23059 88 aa2.09□□□□□ -2.07
CST9YLR394W RME1P32338 300 aaKnown RBP2.09□□□□□ -2.07
CST9YLR394W UTR5P32630 166 aa2.09□□□□□ -2.07
CST9YLR394W YKR032WP36127 104 aa2.09□□□□□ -2.07
CST9YLR394W HEK2P38199 381 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07 RIP-Chip
CST9YLR394W PET100P38958 111 aa2.09□□□□□ -2.07
CST9YLR394W DDI1P40087 428 aa2.09□□□□□ -2.07
CST9YLR394W LAA1P39526 2014 aa2.09□□□□□ -2.07
CST9YLR394W RPL24AP04449 155 aaKnown RBP2.08□□□□□ -2.08
CST9YLR394W PPH21P23594 369 aa2.08□□□□□ -2.08
CST9YLR394W GDH2P33327 1092 aaKnown RBP2.08□□□□□ -2.08
CST9YLR394W HMF1P40037 129 aaKnown RBP2.08□□□□□ -2.08
CST9YLR394W YJL028WP47062 111 aa2.08□□□□□ -2.08
CST9YLR394W YJR146WP47174 117 aa2.08□□□□□ -2.08
CST9YLR394W MDM34P53083 459 aa2.08□□□□□ -2.08
CST9YLR394W YGL034CP53186 121 aa2.08□□□□□ -2.08
CST9YLR394W TIM21P53220 239 aa2.08□□□□□ -2.08
CST9YLR394W CAB4P53332 305 aa2.08□□□□□ -2.08
CST9YLR394W YNL134CP53912 376 aaKnown RBP2.08□□□□□ -2.08
CST9YLR394W EMI1Q04406 187 aa2.08□□□□□ -2.08
CST9YLR394W PLB3Q08108 686 aa2.08□□□□□ -2.08
CST9YLR394W ISD11Q6Q560 94 aa2.08□□□□□ -2.08
CST9YLR394W TRA1P38811 3744 aa2.08□□□□□ -2.08
CST9YLR394W HIS1P00498 297 aaKnown RBP2.08□□□□□ -2.08
CST9YLR394W RAD10P06838 210 aa2.08□□□□□ -2.08
CST9YLR394W DPM1P14020 267 aaKnown RBP2.08□□□□□ -2.08
CST9YLR394W QRI5P32344 111 aa2.08□□□□□ -2.08
CST9YLR394W YHR045WP38775 560 aa2.08□□□□□ -2.08
CST9YLR394W DSN1P40568 576 aa2.08□□□□□ -2.08
CST9YLR394W AGX1P43567 385 aa2.08□□□□□ -2.08
CST9YLR394W SYF2P53277 215 aaPredicted RBP2.08□□□□□ -2.08
CST9YLR394W ALG11P53954 548 aaKnown RBP2.08□□□□□ -2.08
CST9YLR394W EBS1Q03466 884 aaKnown RBP2.08□□□□□ -2.08
CST9YLR394W RRT8Q08219 342 aa2.08□□□□□ -2.08
CST9YLR394W YPL150WQ12152 901 aa2.08□□□□□ -2.08
CST9YLR394W UTP20P35194 2493 aaKnown RBP2.07□□□□□ -2.08
CST9YLR394W MSF1P08425 469 aa2.07□□□□□ -2.08
CST9YLR394W PEX34P25584 144 aa2.07□□□□□ -2.08
CST9YLR394W PRS2P38620 318 aaKnown RBP2.07□□□□□ -2.08
CST9YLR394W YJR012CP47087 207 aa2.07□□□□□ -2.08
CST9YLR394W NIF3P53081 288 aa2.07□□□□□ -2.08
CST9YLR394W AAH1P53909 347 aa2.07□□□□□ -2.08
CST9YLR394W SMD2Q06217 110 aaKnown RBP2.07□□□□□ -2.08
CST9YLR394W YEL009C-AA0A023PZF2 135 aa2.06□□□□□ -2.08
CST9YLR394W RRT12P25381 491 aa2.06□□□□□ -2.08
CST9YLR394W YBR096WP38256 230 aa2.06□□□□□ -2.08
CST9YLR394W BIG1P38813 335 aa2.06□□□□□ -2.08
CST9YLR394W GAA1P39012 614 aa2.06□□□□□ -2.08
CST9YLR394W SMB1P40018 196 aaKnown RBP2.06□□□□□ -2.08
CST9YLR394W GON7P46984 123 aa2.06□□□□□ -2.08
CST9YLR394W GLG2P47011 380 aa2.06□□□□□ -2.08
CST9YLR394W MPP6P53725 186 aaPredicted RBP2.06□□□□□ -2.08
CST9YLR394W CTF19Q02732 369 aa2.06□□□□□ -2.08
CST9YLR394W RDS3Q06835 107 aaPredicted RBP2.06□□□□□ -2.08
CST9YLR394W SMT3Q12306 101 aaKnown RBP2.06□□□□□ -2.08
CST9YLR394W YPL119C-AQ3E751 87 aa2.06□□□□□ -2.08
CST9YLR394W DPB2P24482 689 aaPredicted RBP2.05□□□□□ -2.08
CST9YLR394W CWP1P28319 239 aa2.05□□□□□ -2.08
CST9YLR394W ECM13P38195 257 aa2.05□□□□□ -2.08
CST9YLR394W FIS1P40515 155 aa2.05□□□□□ -2.08
CST9YLR394W RPL10P41805 221 aaKnown RBP2.05□□□□□ -2.08
CST9YLR394W NKP2Q06162 153 aa2.05□□□□□ -2.08
CST9YLR394W VPS68Q12016 184 aa2.05□□□□□ -2.08
CST9YLR394W YOL107WQ12239 342 aa2.05□□□□□ -2.08
CST9YLR394W GEP5Q12393 293 aa2.05□□□□□ -2.08
CST9YLR394W HAP2P06774 265 aa2.04□□□□□ -2.08
CST9YLR394W DAL82P21705 255 aa2.04□□□□□ -2.08
CST9YLR394W SFC1P33303 322 aa2.04□□□□□ -2.08
CST9YLR394W SLX9P53251 210 aaPredicted RBP2.04□□□□□ -2.08
CST9YLR394W RSM10Q03201 203 aa2.04□□□□□ -2.08
CST9YLR394W GRH1Q04410 372 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms