RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	ECM14	P38836	430 aa		13.19	□□□□□ -0.3
CCC1	YLR220W	LNP1	P38878	278 aa		13.19	□□□□□ -0.3
CCC1	YLR220W	YKE4	P40544	346 aa		13.19	□□□□□ -0.3
CCC1	YLR220W	GNA1	P43577	159 aa	Predicted RBP	13.19	□□□□□ -0.3
CCC1	YLR220W	TAF4	P50105	388 aa		13.19	□□□□□ -0.3
CCC1	YLR220W	YNL046W	P53956	172 aa		13.19	□□□□□ -0.3
CCC1	YLR220W	AAC1	P04710	309 aa		13.18	□□□□□ -0.3
CCC1	YLR220W	YML003W	P0CF16	290 aa		13.18	□□□□□ -0.3
CCC1	YLR220W	PUP1	P25043	261 aa		13.18	□□□□□ -0.3
CCC1	YLR220W	RIB7	P33312	244 aa		13.18	□□□□□ -0.3
CCC1	YLR220W	YCK3	P39962	524 aa		13.18	□□□□□ -0.3
CCC1	YLR220W	QRI1	P43123	477 aa	Known RBP	13.18	□□□□□ -0.3
CCC1	YLR220W	AIM25	P47140	327 aa		13.18	□□□□□ -0.3
CCC1	YLR220W	PEF1	P53238	335 aa		13.18	□□□□□ -0.3
CCC1	YLR220W	YOR186W	Q08560	144 aa		13.18	□□□□□ -0.3
CCC1	YLR220W	YOR385W	Q08909	290 aa		13.18	□□□□□ -0.3
CCC1	YLR220W	HTZ1	Q12692	134 aa	Known RBP	13.18	□□□□□ -0.3
CCC1	YLR220W	RPL25	P04456	142 aa	Known RBP	13.17	□□□□□ -0.3
CCC1	YLR220W	CDC34	P14682	295 aa		13.17	□□□□□ -0.3
CCC1	YLR220W	RFA1	P22336	621 aa	Known RBP	13.17	□□□□□ -0.3
CCC1	YLR220W	RPA14	P50106	137 aa		13.17	□□□□□ -0.3
CCC1	YLR220W	TY1A-MR1	Q04215	440 aa		13.17	□□□□□ -0.3
CCC1	YLR220W	YMR254C	Q04838	102 aa		13.17	□□□□□ -0.3
CCC1	YLR220W	GRC3	Q07845	632 aa		13.17	□□□□□ -0.3
CCC1	YLR220W	MPD1	Q12404	318 aa	Known RBP	13.17	□□□□□ -0.3
CCC1	YLR220W	YCR101C	P25607	182 aa		13.16	□□□□□ -0.3
CCC1	YLR220W	AGA2	P32781	87 aa		13.16	□□□□□ -0.3
CCC1	YLR220W	YBL010C	P32788	280 aa		13.16	□□□□□ -0.3
CCC1	YLR220W	NAT2	P37293	288 aa		13.16	□□□□□ -0.3
CCC1	YLR220W	YLR031W	Q07978	186 aa		13.16	□□□□□ -0.3
CCC1	YLR220W	ENV7	Q12003	364 aa		13.16	□□□□□ -0.3
CCC1	YLR220W	ERP4	Q12450	207 aa		13.16	□□□□□ -0.3
CCC1	YLR220W	TDH2	P00358	332 aa	Known RBP	13.15	□□□□□ -0.3
CCC1	YLR220W	SPC29	P33419	253 aa		13.15	□□□□□ -0.3
CCC1	YLR220W	MRPL27	P36526	146 aa	Predicted RBP	13.15	□□□□□ -0.3
CCC1	YLR220W	CCS1	P40202	249 aa	Known RBP	13.15	□□□□□ -0.3
CCC1	YLR220W	MRX5	P47007	382 aa		13.15	□□□□□ -0.3
CCC1	YLR220W	WSC3	Q12215	556 aa		13.15	□□□□□ -0.3
CCC1	YLR220W	EAF3	Q12432	401 aa		13.15	□□□□□ -0.3
CCC1	YLR220W	CDC23	P16522	626 aa		13.14	□□□□□ -0.31
CCC1	YLR220W	RMD6	P39975	231 aa		13.14	□□□□□ -0.31
CCC1	YLR220W	MSE1	P48525	536 aa		13.14	□□□□□ -0.31
CCC1	YLR220W	TY1A-DR2	Q03964	440 aa	Known RBP	13.14	□□□□□ -0.31
CCC1	YLR220W	GMC1	Q04399	608 aa		13.14	□□□□□ -0.31
CCC1	YLR220W	SPS2	P08459	502 aa		13.13	□□□□□ -0.31
CCC1	YLR220W	VMA3	P25515	160 aa		13.13	□□□□□ -0.31
CCC1	YLR220W	IMP1	P28627	190 aa		13.13	□□□□□ -0.31
CCC1	YLR220W	PRS2	P38620	318 aa	Known RBP	13.13	□□□□□ -0.31
CCC1	YLR220W	GLR1	P41921	483 aa	Known RBP	13.13	□□□□□ -0.31
CCC1	YLR220W	GON7	P46984	123 aa		13.13	□□□□□ -0.31
CCC1	YLR220W	TEX1	P53851	422 aa	Known RBP	13.13	□□□□□ -0.31
CCC1	YLR220W	TIM10	P87108	93 aa		13.13	□□□□□ -0.31
CCC1	YLR220W	YLR108C	Q12259	485 aa		13.13	□□□□□ -0.31
CCC1	YLR220W	GCD1	P09032	578 aa	Predicted RBP	13.12	□□□□□ -0.31
CCC1	YLR220W	NHP6B	P11633	99 aa	Known RBP	13.12	□□□□□ -0.31
CCC1	YLR220W	YCP4	P25349	247 aa	Known RBP	13.12	□□□□□ -0.31
CCC1	YLR220W	SBH2	P52871	88 aa		13.12	□□□□□ -0.31
CCC1	YLR220W	MRPS16	Q02608	121 aa		13.12	□□□□□ -0.31
CCC1	YLR220W	YPL067C	Q02754	198 aa		13.12	□□□□□ -0.31
CCC1	YLR220W	WHI5	Q12416	295 aa		13.12	□□□□□ -0.31
CCC1	YLR220W	REP2	P03872	296 aa		13.11	□□□□□ -0.31
CCC1	YLR220W	FMT1	P32785	401 aa		13.11	□□□□□ -0.31
CCC1	YLR220W	UPS1	Q05776	175 aa		13.11	□□□□□ -0.31
CCC1	YLR220W	SNA4	Q07549	140 aa		13.11	□□□□□ -0.31
CCC1	YLR220W	FCY22	Q12119	530 aa		13.11	□□□□□ -0.31
CCC1	YLR220W	RPL39	P04650	51 aa		13.1	□□□□□ -0.31
CCC1	YLR220W	CPR4	P25334	318 aa		13.1	□□□□□ -0.31
CCC1	YLR220W	RNP1	P32385	249 aa		13.1	□□□□□ -0.31
CCC1	YLR220W	YBR242W	P38331	238 aa		13.1	□□□□□ -0.31
CCC1	YLR220W	LSM1	P47017	172 aa	Known RBP	13.1	□□□□□ -0.31
CCC1	YLR220W	TMC1	Q08422	150 aa	Predicted RBP	13.1	□□□□□ -0.31
CCC1	YLR220W	URA3	P03962	267 aa		13.09	□□□□□ -0.31
CCC1	YLR220W	BPH1	P25356	2167 aa		13.09	□□□□□ -0.31
CCC1	YLR220W	MRPL3	P36516	390 aa		13.09	□□□□□ -0.31
CCC1	YLR220W	YER121W	P40076	114 aa		13.09	□□□□□ -0.31
CCC1	YLR220W	RSM27	P53305	110 aa		13.09	□□□□□ -0.31
CCC1	YLR220W	GIM3	P53900	129 aa		13.09	□□□□□ -0.31
CCC1	YLR220W	PET122	P10355	254 aa		13.08	□□□□□ -0.32
CCC1	YLR220W	YBR197C	P38306	217 aa		13.08	□□□□□ -0.32
CCC1	YLR220W	OSH7	P38755	437 aa		13.08	□□□□□ -0.32
CCC1	YLR220W	YIL012W	P40551	113 aa		13.08	□□□□□ -0.32
CCC1	YLR220W	HNT2	P49775	206 aa		13.08	□□□□□ -0.32
CCC1	YLR220W	SYM1	Q06563	197 aa		13.08	□□□□□ -0.32
CCC1	YLR220W	SPO24	Q3E752	67 aa		13.08	□□□□□ -0.32
CCC1	YLR220W	OCH1	P31755	480 aa		13.07	□□□□□ -0.32
CCC1	YLR220W	ACH1	P32316	526 aa		13.07	□□□□□ -0.32
CCC1	YLR220W	SLM1	P40485	686 aa		13.07	□□□□□ -0.32
CCC1	YLR220W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	13.07	□□□□□ -0.32	not detected
CCC1	YLR220W	DIE2	P50076	525 aa		13.07	□□□□□ -0.32
CCC1	YLR220W	GPG1	P53130	126 aa		13.07	□□□□□ -0.32
CCC1	YLR220W	SMX3	P54999	86 aa	Predicted RBP	13.07	□□□□□ -0.32
CCC1	YLR220W	FRE8	Q12209	686 aa		13.07	□□□□□ -0.32
CCC1	YLR220W	PET20	Q99373	253 aa		13.07	□□□□□ -0.32
CCC1	YLR220W	GAL1	P04385	528 aa		13.06	□□□□□ -0.32
CCC1	YLR220W	APA2	P22108	325 aa		13.06	□□□□□ -0.32
CCC1	YLR220W	RNA14	P25298	677 aa	Known RBP	13.06	□□□□□ -0.32
CCC1	YLR220W	SWD3	P38123	315 aa		13.06	□□□□□ -0.32
CCC1	YLR220W	FIG1	P38224	298 aa		13.06	□□□□□ -0.32
CCC1	YLR220W	PRM5	P40476	318 aa		13.06	□□□□□ -0.32
CCC1	YLR220W	YML018C	Q03730	393 aa		13.06	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms