RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C YMR253CQ04835 414 aa9.82□□□□□ -0.84
SPT8YLR055C YDL086WQ07505 273 aa9.82□□□□□ -0.84
SPT8YLR055C AVO1Q08236 1176 aa9.82□□□□□ -0.84
SPT8YLR055C FRE7Q12333 620 aa9.82□□□□□ -0.84
SPT8YLR055C SET6Q12529 373 aa9.82□□□□□ -0.84
SPT8YLR055C OPI3P05375 206 aa9.82□□□□□ -0.84
SPT8YLR055C SRP102P36057 244 aaPredicted RBP9.82□□□□□ -0.84
SPT8YLR055C SDH4P37298 181 aa9.82□□□□□ -0.84
SPT8YLR055C PAC1P39946 494 aaKnown RBP9.82□□□□□ -0.84
SPT8YLR055C DLS1P40366 167 aa9.82□□□□□ -0.84
SPT8YLR055C UFD1P53044 361 aa9.82□□□□□ -0.84
SPT8YLR055C PKP2P53170 491 aa9.82□□□□□ -0.84
SPT8YLR055C TIM21P53220 239 aa9.82□□□□□ -0.84
SPT8YLR055C NRG1Q03125 231 aa9.82□□□□□ -0.84
SPT8YLR055C COQ10Q08058 207 aa9.82□□□□□ -0.84
SPT8YLR055C COX19Q3E731 98 aa9.82□□□□□ -0.84
SPT8YLR055C GNA1P43577 159 aaPredicted RBP9.81□□□□□ -0.84
SPT8YLR055C BDS1Q08347 646 aa9.81□□□□□ -0.84
SPT8YLR055C RAD28Q12021 506 aa9.81□□□□□ -0.84
SPT8YLR055C CDC7P06243 507 aa9.8□□□□□ -0.84
SPT8YLR055C CTA1P15202 515 aa9.8□□□□□ -0.84
SPT8YLR055C RPB8P20436 146 aa9.8□□□□□ -0.84
SPT8YLR055C YGR066CP53242 292 aa9.8□□□□□ -0.84
SPT8YLR055C NCE101Q02820 53 aa9.8□□□□□ -0.84
SPT8YLR055C MRPL1Q04599 285 aa9.8□□□□□ -0.84
SPT8YLR055C RTT103Q05543 409 aa9.8□□□□□ -0.84
SPT8YLR055C ERG3P32353 365 aa9.79□□□□□ -0.84
SPT8YLR055C CLB6P32943 380 aa9.79□□□□□ -0.84
SPT8YLR055C RIB5P38145 238 aa9.79□□□□□ -0.84
SPT8YLR055C OCA1P50946 238 aaPredicted RBP9.79□□□□□ -0.84
SPT8YLR055C ERP1Q05359 219 aaKnown RBP9.79□□□□□ -0.84
SPT8YLR055C MCT1Q12283 360 aa9.79□□□□□ -0.84
SPT8YLR055C COX1P00401 534 aa9.79□□□□□ -0.84
SPT8YLR055C ADH3P07246 375 aaKnown RBP9.79□□□□□ -0.84
SPT8YLR055C POF1P25576 258 aa9.79□□□□□ -0.84
SPT8YLR055C SSS1P35179 80 aa9.79□□□□□ -0.84
SPT8YLR055C YNK1P36010 153 aaKnown RBP9.79□□□□□ -0.84
SPT8YLR055C UMP1P38293 148 aa9.79□□□□□ -0.84
SPT8YLR055C BRR6P53062 197 aa9.79□□□□□ -0.84
SPT8YLR055C RLM1Q12224 676 aa9.79□□□□□ -0.84
SPT8YLR055C VAM3Q12241 283 aa9.79□□□□□ -0.84
SPT8YLR055C YLR358CO13565 187 aa9.78□□□□□ -0.84
SPT8YLR055C ARO4P32449 370 aaKnown RBP9.78□□□□□ -0.84
SPT8YLR055C MRPL4P36517 319 aa9.78□□□□□ -0.84
SPT8YLR055C SPC25P40014 221 aa9.78□□□□□ -0.84
SPT8YLR055C SLM1P40485 686 aa9.78□□□□□ -0.84
SPT8YLR055C HXT14P42833 540 aa9.78□□□□□ -0.84
SPT8YLR055C YJR141WP47172 347 aaPredicted RBP9.78□□□□□ -0.84
SPT8YLR055C PEF1P53238 335 aa9.78□□□□□ -0.84
SPT8YLR055C MPA43P53583 542 aaPredicted RBP9.78□□□□□ -0.84
SPT8YLR055C SKO1Q02100 647 aa9.78□□□□□ -0.84
SPT8YLR055C PET191Q02772 108 aa9.78□□□□□ -0.84
SPT8YLR055C SRP1Q02821 542 aaKnown RBP9.78□□□□□ -0.84
SPT8YLR055C ERF2Q06551 359 aa9.78□□□□□ -0.84
SPT8YLR055C ERP4Q12450 207 aa9.78□□□□□ -0.84
SPT8YLR055C CYT1P07143 309 aa9.77□□□□□ -0.84
SPT8YLR055C MEK1P24719 497 aaPredicted RBP9.77□□□□□ -0.84
SPT8YLR055C YEA6P39953 335 aa9.77□□□□□ -0.84
SPT8YLR055C YNL208WP40159 199 aaKnown RBP9.77□□□□□ -0.84
SPT8YLR055C YIL077CP40508 320 aa9.77□□□□□ -0.84
SPT8YLR055C ERJ5P43613 295 aaPredicted RBP9.77□□□□□ -0.84
SPT8YLR055C NIT2P47016 307 aa9.77□□□□□ -0.84
SPT8YLR055C TAX4P47030 604 aa9.77□□□□□ -0.84
SPT8YLR055C YJR115WP47152 169 aa9.77□□□□□ -0.84
SPT8YLR055C MEH1Q02205 184 aa9.77□□□□□ -0.84
SPT8YLR055C ADD37Q03233 198 aa9.77□□□□□ -0.84
SPT8YLR055C YPT1P01123 206 aaKnown RBP9.77□□□□□ -0.85
SPT8YLR055C YSF3P0C074 85 aaPredicted RBP9.77□□□□□ -0.85
SPT8YLR055C PPA2P28239 310 aa9.77□□□□□ -0.85
SPT8YLR055C PRS2P38620 318 aaKnown RBP9.77□□□□□ -0.85
SPT8YLR055C SLZ1P40167 298 aa9.77□□□□□ -0.85
SPT8YLR055C LCL3P53153 274 aa9.77□□□□□ -0.85
SPT8YLR055C YIF1P53845 314 aaKnown RBP9.77□□□□□ -0.85
SPT8YLR055C YPL108WQ02872 168 aaPredicted RBP9.77□□□□□ -0.85
SPT8YLR055C RSM10Q03201 203 aa9.77□□□□□ -0.85
SPT8YLR055C TMA23Q03525 211 aa9.77□□□□□ -0.85
SPT8YLR055C HAS1Q03532 505 aaKnown RBP9.77□□□□□ -0.85
SPT8YLR055C ENB1Q08299 606 aa9.77□□□□□ -0.85
SPT8YLR055C SRL2Q12020 392 aa9.77□□□□□ -0.85
SPT8YLR055C SEC59P20048 519 aa9.76□□□□□ -0.85
SPT8YLR055C STP22P25604 385 aa9.76□□□□□ -0.85
SPT8YLR055C NTF2P33331 125 aaKnown RBP9.76□□□□□ -0.85
SPT8YLR055C RFC2P40348 353 aa9.76□□□□□ -0.85
SPT8YLR055C MRPS17Q03246 237 aaPredicted RBP9.76□□□□□ -0.85
SPT8YLR055C YMR210WQ03649 449 aa9.76□□□□□ -0.85
SPT8YLR055C EKI1Q03764 534 aa9.76□□□□□ -0.85
SPT8YLR055C YBR013CP38215 129 aa9.75□□□□□ -0.85
SPT8YLR055C YHR180WP38868 163 aa9.75□□□□□ -0.85
SPT8YLR055C SNO3P43544 222 aa9.75□□□□□ -0.85
SPT8YLR055C ALG9P53868 555 aaKnown RBP9.75□□□□□ -0.85
SPT8YLR055C ACS1Q01574 713 aa9.75□□□□□ -0.85
SPT8YLR055C REX3Q12090 404 aa9.75□□□□□ -0.85
SPT8YLR055C MCP1Q12106 302 aa9.75□□□□□ -0.85
SPT8YLR055C YCT1Q12235 531 aa9.75□□□□□ -0.85
SPT8YLR055C QCR2P07257 368 aa9.75□□□□□ -0.85
SPT8YLR055C OLE1P21147 510 aaKnown RBP9.75□□□□□ -0.85
SPT8YLR055C RFA1P22336 621 aaKnown RBP9.75□□□□□ -0.85
SPT8YLR055C CPR5P35176 225 aa9.75□□□□□ -0.85
SPT8YLR055C AVT5P38176 459 aa9.75□□□□□ -0.85
SPT8YLR055C RPL13BP40212 199 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 149.8 ms