RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C EXG1P23776 448 aaKnown RBP2.53□□□□□ -2
SDO1YLR022C DOA4P32571 926 aa2.53□□□□□ -2
SDO1YLR022C RAD23P32628 398 aaKnown RBP2.53□□□□□ -2
SDO1YLR022C ECT1P33412 323 aa2.53□□□□□ -2
SDO1YLR022C YCR087C-AP37263 153 aa2.53□□□□□ -2
SDO1YLR022C MIX23P38162 196 aa2.53□□□□□ -2
SDO1YLR022C ATG7P38862 630 aa2.53□□□□□ -2
SDO1YLR022C YHR180WP38868 163 aa2.53□□□□□ -2
SDO1YLR022C COG3P40094 801 aa2.53□□□□□ -2
SDO1YLR022C YGL185CP53100 379 aa2.53□□□□□ -2
SDO1YLR022C POP6P53218 158 aa2.53□□□□□ -2
SDO1YLR022C YNR064CP53750 290 aa2.53□□□□□ -2
SDO1YLR022C GPI15P53961 229 aa2.53□□□□□ -2
SDO1YLR022C RMI1Q02685 241 aa2.53□□□□□ -2
SDO1YLR022C RNY1Q02933 434 aaKnown RBP2.53□□□□□ -2
SDO1YLR022C SRL4Q03085 281 aa2.53□□□□□ -2
SDO1YLR022C RVB1Q03940 463 aaKnown RBP2.53□□□□□ -2
SDO1YLR022C IRC25Q07951 179 aa2.53□□□□□ -2
SDO1YLR022C FIT3Q08907 204 aa2.53□□□□□ -2
SDO1YLR022C SLF1Q12034 447 aaKnown RBP2.53□□□□□ -2
SDO1YLR022C USB1Q12208 290 aaKnown RBP2.53□□□□□ -2
SDO1YLR022C YLR108CQ12259 485 aa2.53□□□□□ -2
SDO1YLR022C PAA1Q12447 191 aaKnown RBP2.53□□□□□ -2
SDO1YLR022C FMP16Q12497 93 aa2.53□□□□□ -2
SDO1YLR022C YPL247CQ12523 523 aa2.53□□□□□ -2
SDO1YLR022C ADF1Q2V2Q1 113 aa2.53□□□□□ -2
SDO1YLR022C COS2P0CX12 379 aa2.52□□□□□ -2.01
SDO1YLR022C COS3P0CX13 379 aa2.52□□□□□ -2.01
SDO1YLR022C PET9P18239 318 aaKnown RBP2.52□□□□□ -2.01
SDO1YLR022C DBR1P24309 405 aaKnown RBP2.52□□□□□ -2.01
SDO1YLR022C LSB5P25369 354 aa2.52□□□□□ -2.01
SDO1YLR022C CSM1P25651 190 aa2.52□□□□□ -2.01
SDO1YLR022C YCR090CP25654 182 aaKnown RBP2.52□□□□□ -2.01
SDO1YLR022C RPL5P26321 297 aaKnown RBP2.52□□□□□ -2.01
SDO1YLR022C ACB1P31787 87 aa2.52□□□□□ -2.01
SDO1YLR022C SUA5P32579 426 aa2.52□□□□□ -2.01
SDO1YLR022C RPS1AP33442 255 aaKnown RBP2.52□□□□□ -2.01
SDO1YLR022C CTR2P38865 189 aa2.52□□□□□ -2.01
SDO1YLR022C AIM10P39965 576 aaKnown RBP2.52□□□□□ -2.01
SDO1YLR022C ISC1P40015 477 aaKnown RBP2.52□□□□□ -2.01
SDO1YLR022C COS4P43542 379 aa2.52□□□□□ -2.01
SDO1YLR022C COX16P47081 118 aa2.52□□□□□ -2.01
SDO1YLR022C SSN8P47821 323 aa2.52□□□□□ -2.01
SDO1YLR022C YIP1P53039 248 aa2.52□□□□□ -2.01
SDO1YLR022C YMR102CQ03177 834 aa2.52□□□□□ -2.01
SDO1YLR022C BET5Q03630 159 aa2.52□□□□□ -2.01
SDO1YLR022C MFG1Q07684 458 aa2.52□□□□□ -2.01
SDO1YLR022C SIA1Q12212 622 aa2.52□□□□□ -2.01
SDO1YLR022C YMR030W-AQ3E760 96 aa2.52□□□□□ -2.01
SDO1YLR022C ADH2P00331 348 aaKnown RBP2.51□□□□□ -2.01
SDO1YLR022C OPI3P05375 206 aa2.51□□□□□ -2.01
SDO1YLR022C TPK3P05986 398 aa2.51□□□□□ -2.01
SDO1YLR022C RAD7P06779 565 aa2.51□□□□□ -2.01
SDO1YLR022C CKI1P20485 582 aa2.51□□□□□ -2.01
SDO1YLR022C YCR100CP25606 316 aa2.51□□□□□ -2.01
SDO1YLR022C AUA1P32450 94 aa2.51□□□□□ -2.01
SDO1YLR022C PHA2P32452 334 aa2.51□□□□□ -2.01
SDO1YLR022C YKR015CP36111 568 aa2.51□□□□□ -2.01
SDO1YLR022C PEX32P38292 413 aa2.51□□□□□ -2.01
SDO1YLR022C STP2P38704 541 aa2.51□□□□□ -2.01
SDO1YLR022C YER085CP40058 173 aa2.51□□□□□ -2.01
SDO1YLR022C SEC9P40357 651 aa2.51□□□□□ -2.01
SDO1YLR022C YGR168CP53293 376 aa2.51□□□□□ -2.01
SDO1YLR022C MRPL50P53724 139 aa2.51□□□□□ -2.01
SDO1YLR022C ECM11Q04110 302 aa2.51□□□□□ -2.01
SDO1YLR022C SMP3Q04174 516 aa2.51□□□□□ -2.01
SDO1YLR022C IRC19Q07843 230 aa2.51□□□□□ -2.01
SDO1YLR022C NIP7Q08962 181 aaKnown RBP2.51□□□□□ -2.01
SDO1YLR022C MCP1Q12106 302 aa2.51□□□□□ -2.01
SDO1YLR022C ORT1Q12375 292 aa2.51□□□□□ -2.01
SDO1YLR022C AIM45Q12480 344 aaKnown RBP2.51□□□□□ -2.01
SDO1YLR022C RAS2P01120 322 aaKnown RBP2.5□□□□□ -2.01
SDO1YLR022C CMD1P06787 147 aaKnown RBP2.5□□□□□ -2.01
SDO1YLR022C GCY1P14065 312 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SDO1YLR022C MRPL25P23369 157 aa2.5□□□□□ -2.01
SDO1YLR022C YCR016WP25617 290 aaKnown RBP2.5□□□□□ -2.01
SDO1YLR022C VAM7P32912 316 aa2.5□□□□□ -2.01
SDO1YLR022C MSN4P33749 630 aa2.5□□□□□ -2.01
SDO1YLR022C YKL071WP36086 256 aa2.5□□□□□ -2.01
SDO1YLR022C GPI18P38211 433 aa2.5□□□□□ -2.01
SDO1YLR022C MSS2P40990 351 aa2.5□□□□□ -2.01
SDO1YLR022C BNA6P43619 295 aa2.5□□□□□ -2.01
SDO1YLR022C YNR048WP53740 393 aa2.5□□□□□ -2.01
SDO1YLR022C SPR6Q01684 191 aa2.5□□□□□ -2.01
SDO1YLR022C VPS60Q03390 229 aa2.5□□□□□ -2.01
SDO1YLR022C NAT4Q04751 285 aa2.5□□□□□ -2.01
SDO1YLR022C GTO3Q04806 366 aa2.5□□□□□ -2.01
SDO1YLR022C SSQ1Q05931 657 aaPredicted RBP2.5□□□□□ -2.01
SDO1YLR022C SNT309Q06091 175 aaPredicted RBP2.5□□□□□ -2.01
SDO1YLR022C ASA1Q06822 443 aa2.5□□□□□ -2.01
SDO1YLR022C YPL199CQ08954 240 aa2.5□□□□□ -2.01
SDO1YLR022C TPT1Q12272 230 aaKnown RBP2.5□□□□□ -2.01
SDO1YLR022C YOP1Q12402 180 aa2.5□□□□□ -2.01
SDO1YLR022C RPL39P04650 51 aa2.49□□□□□ -2.01
SDO1YLR022C RPS16AP0CX51 143 aaKnown RBP2.49□□□□□ -2.01
SDO1YLR022C RPS16BP0CX52 143 aaKnown RBP2.49□□□□□ -2.01
SDO1YLR022C GIT1P25346 518 aa2.49□□□□□ -2.01
SDO1YLR022C CAT2P32796 670 aaKnown RBP2.49□□□□□ -2.01
SDO1YLR022C COA1P40452 197 aa2.49□□□□□ -2.01
SDO1YLR022C PRM5P40476 318 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms