RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C NAT2P37293 288 aa1.69□□□□□ -2.14
RTT101YJL047C IPI1P38803 334 aaPredicted RBP1.69□□□□□ -2.14
RTT101YJL047C PTI1P39927 425 aaPredicted RBP1.69□□□□□ -2.14
RTT101YJL047C PCI8P40512 444 aa1.69□□□□□ -2.14
RTT101YJL047C YFL064CP43540 174 aa1.69□□□□□ -2.14
RTT101YJL047C NCA3P46955 337 aa1.69□□□□□ -2.14
RTT101YJL047C AVT1P47082 602 aa1.69□□□□□ -2.14
RTT101YJL047C YJR085CP47131 105 aaKnown RBP1.69□□□□□ -2.14
RTT101YJL047C IDP3P53982 420 aaKnown RBP1.69□□□□□ -2.14
RTT101YJL047C SWP1Q02795 286 aa1.69□□□□□ -2.14
RTT101YJL047C YDR415CQ04033 374 aaPredicted RBP1.69□□□□□ -2.14
RTT101YJL047C YOR186WQ08560 144 aa1.69□□□□□ -2.14
RTT101YJL047C YPR202WQ08993 238 aa1.69□□□□□ -2.14
RTT101YJL047C AYT1Q12226 474 aa1.69□□□□□ -2.14
RTT101YJL047C RIB3Q99258 208 aa1.69□□□□□ -2.14
RTT101YJL047C SCO1P23833 295 aa1.69□□□□□ -2.14
RTT101YJL047C MRPL39P36533 70 aa1.69□□□□□ -2.14
RTT101YJL047C DOG1P38774 246 aa1.69□□□□□ -2.14
RTT101YJL047C LSM4P40070 187 aaKnown RBP1.69□□□□□ -2.14
RTT101YJL047C RPR2P40571 144 aa1.69□□□□□ -2.14
RTT101YJL047C LSM7P53905 115 aaKnown RBP1.69□□□□□ -2.14
RTT101YJL047C RPL15BP54780 204 aaPredicted RBP1.69□□□□□ -2.14
RTT101YJL047C YMR254CQ04838 102 aa1.69□□□□□ -2.14
RTT101YJL047C HRI1Q05905 244 aaKnown RBP1.69□□□□□ -2.14
RTT101YJL047C LIP2Q06005 328 aa1.69□□□□□ -2.14
RTT101YJL047C YPD1Q07688 167 aa1.69□□□□□ -2.14
RTT101YJL047C YLR030WQ07967 263 aa1.69□□□□□ -2.14
RTT101YJL047C YPL278CQ08990 100 aa1.69□□□□□ -2.14
RTT101YJL047C TIR4Q12218 487 aaPredicted RBP1.69□□□□□ -2.14
RTT101YJL047C MRPS28P21771 286 aa1.68□□□□□ -2.14
RTT101YJL047C BUB2P26448 306 aaPredicted RBP1.68□□□□□ -2.14
RTT101YJL047C ERG24P32462 438 aaKnown RBP1.68□□□□□ -2.14
RTT101YJL047C PTM1P32857 523 aa1.68□□□□□ -2.14
RTT101YJL047C SCO2P38072 301 aa1.68□□□□□ -2.14
RTT101YJL047C ARN2P38724 620 aa1.68□□□□□ -2.14
RTT101YJL047C SPL2P38839 148 aa1.68□□□□□ -2.14
RTT101YJL047C UBP5P39944 805 aa1.68□□□□□ -2.14
RTT101YJL047C UFE1P41834 346 aa1.68□□□□□ -2.14
RTT101YJL047C COQ5P49017 307 aa1.68□□□□□ -2.14
RTT101YJL047C SCS3P53012 380 aa1.68□□□□□ -2.14
RTT101YJL047C MRH4P53166 561 aa1.68□□□□□ -2.14
RTT101YJL047C SDS23P53172 527 aa1.68□□□□□ -2.14
RTT101YJL047C COG7P53195 279 aa1.68□□□□□ -2.14
RTT101YJL047C WSC2P53832 503 aa1.68□□□□□ -2.14
RTT101YJL047C DYN2Q02647 92 aa1.68□□□□□ -2.14
RTT101YJL047C YPL113CQ02961 396 aa1.68□□□□□ -2.14
RTT101YJL047C PAL1Q05518 499 aaKnown RBP1.68□□□□□ -2.14
RTT101YJL047C CRC1Q12289 327 aa1.68□□□□□ -2.14
RTT101YJL047C CMD1P06787 147 aaKnown RBP1.68□□□□□ -2.14
RTT101YJL047C YFL068WP0CX99 160 aa1.68□□□□□ -2.14
RTT101YJL047C YLL066W-AP0CY00 160 aa1.68□□□□□ -2.14
RTT101YJL047C YLL067W-AP0CY01 160 aa1.68□□□□□ -2.14
RTT101YJL047C FCY2P17064 533 aa1.68□□□□□ -2.14
RTT101YJL047C CDC50P25656 391 aa1.68□□□□□ -2.14
RTT101YJL047C URA10P30402 227 aa1.68□□□□□ -2.14
RTT101YJL047C PRS3P38689 320 aaKnown RBP1.68□□□□□ -2.14
RTT101YJL047C DOG2P38773 246 aa1.68□□□□□ -2.14
RTT101YJL047C GLE2P40066 365 aa1.68□□□□□ -2.14
RTT101YJL047C CFD1P40558 293 aa1.68□□□□□ -2.14
RTT101YJL047C FAR7P43592 221 aa1.68□□□□□ -2.14
RTT101YJL047C APS3P47064 194 aa1.68□□□□□ -2.14
RTT101YJL047C BNS1P50084 137 aa1.68□□□□□ -2.14
RTT101YJL047C ERV29P53337 310 aa1.68□□□□□ -2.14
RTT101YJL047C ADD37Q03233 198 aa1.68□□□□□ -2.14
RTT101YJL047C YDR249CQ03787 373 aa1.68□□□□□ -2.14
RTT101YJL047C FSH2Q05015 223 aa1.68□□□□□ -2.14
RTT101YJL047C HCR1Q05775 265 aaKnown RBP1.68□□□□□ -2.14
RTT101YJL047C YPL245WQ12179 454 aaKnown RBP1.68□□□□□ -2.14
RTT101YJL047C YLR046CQ12253 270 aa1.68□□□□□ -2.14
RTT101YJL047C BBP1Q12365 385 aa1.68□□□□□ -2.14
RTT101YJL047C HTZ1Q12692 134 aaKnown RBP1.68□□□□□ -2.14
RTT101YJL047C WIP1Q2V2P8 89 aa1.68□□□□□ -2.14
RTT101YJL047C YAL063C-AQ3E791 96 aa1.68□□□□□ -2.14
RTT101YJL047C PSK1P31374 1356 aa1.68□□□□□ -2.14
RTT101YJL047C TAF2P23255 1407 aa1.67□□□□□ -2.14
RTT101YJL047C RPL15AP05748 204 aaKnown RBP1.67□□□□□ -2.14
RTT101YJL047C NHP6AP11632 93 aaKnown RBP1.67□□□□□ -2.14
RTT101YJL047C POP8P38208 133 aa1.67□□□□□ -2.14
RTT101YJL047C TRR2P38816 342 aa1.67□□□□□ -2.14
RTT101YJL047C RRG9P40156 214 aa1.67□□□□□ -2.14
RTT101YJL047C YIL012WP40551 113 aa1.67□□□□□ -2.14
RTT101YJL047C SOL1P50278 321 aa1.67□□□□□ -2.14
RTT101YJL047C FMP48P53233 369 aa1.67□□□□□ -2.14
RTT101YJL047C ELP3Q02908 557 aaKnown RBP1.67□□□□□ -2.14
RTT101YJL047C TSA2Q04120 196 aa1.67□□□□□ -2.14
RTT101YJL047C MSI1P13712 422 aa1.67□□□□□ -2.14
RTT101YJL047C AHC2P25649 128 aa1.67□□□□□ -2.14
RTT101YJL047C PRY2P36110 329 aa1.67□□□□□ -2.14
RTT101YJL047C MOH1P38191 138 aa1.67□□□□□ -2.14
RTT101YJL047C YBR285WP38354 144 aa1.67□□□□□ -2.14
RTT101YJL047C YER186CP40101 306 aa1.67□□□□□ -2.14
RTT101YJL047C HAC1P41546 238 aa1.67□□□□□ -2.14
RTT101YJL047C SNO3P43544 222 aa1.67□□□□□ -2.14
RTT101YJL047C YJR015WP47090 510 aa1.67□□□□□ -2.14
RTT101YJL047C YGR050CP53231 118 aa1.67□□□□□ -2.14
RTT101YJL047C TIM8P57744 87 aa1.67□□□□□ -2.14
RTT101YJL047C MAK3Q03503 176 aa1.67□□□□□ -2.14
RTT101YJL047C YMR320WQ04897 101 aa1.67□□□□□ -2.14
RTT101YJL047C YLR177WQ06251 628 aa1.67□□□□□ -2.14
RTT101YJL047C YLR179CQ06252 201 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms