RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W MCP1Q12106 302 aa3.07□□□□□ -1.92
BCD1YHR040W NCE102Q12207 173 aaRIP-Chip data3.07□□□□□ -1.92not detected
BCD1YHR040W BBP1Q12365 385 aa3.07□□□□□ -1.92
BCD1YHR040W ATG31Q12421 196 aa3.07□□□□□ -1.92
BCD1YHR040W RDI1Q12434 202 aa3.07□□□□□ -1.92
BCD1YHR040W MRPL23Q12487 163 aaPredicted RBP3.07□□□□□ -1.92
BCD1YHR040W ARG80P07249 177 aa3.06□□□□□ -1.92
BCD1YHR040W CHO1P08456 276 aa3.06□□□□□ -1.92
BCD1YHR040W RPL20AP0CX23 172 aaKnown RBP3.06□□□□□ -1.92
BCD1YHR040W RPL20BP0CX24 172 aaPredicted RBP3.06□□□□□ -1.92
BCD1YHR040W MATALPHA1P0CY06 175 aa3.06□□□□□ -1.92
BCD1YHR040W HMLALPHA1P0CY07 175 aa3.06□□□□□ -1.92
BCD1YHR040W NAM2P11325 894 aa3.06□□□□□ -1.92
BCD1YHR040W YPK2P18961 677 aa3.06□□□□□ -1.92
BCD1YHR040W MAG1P22134 296 aaKnown RBP3.06□□□□□ -1.92
BCD1YHR040W RNA14P25298 677 aaKnown RBP3.06□□□□□ -1.92
BCD1YHR040W PMT2P31382 759 aa3.06□□□□□ -1.92
BCD1YHR040W ATS1P31386 333 aa3.06□□□□□ -1.92
BCD1YHR040W HMX1P32339 317 aa3.06□□□□□ -1.92
BCD1YHR040W RNP1P32385 249 aa3.06□□□□□ -1.92
BCD1YHR040W MDH3P32419 343 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
BCD1YHR040W ECM25P32525 599 aa3.06□□□□□ -1.92
BCD1YHR040W REC114P32841 428 aa3.06□□□□□ -1.92
BCD1YHR040W APD1P38281 316 aa3.06□□□□□ -1.92
BCD1YHR040W COS8P38723 381 aa3.06□□□□□ -1.92
BCD1YHR040W HTD2P38790 280 aaKnown RBP3.06□□□□□ -1.92
BCD1YHR040W RRP4P38792 359 aaKnown RBP3.06□□□□□ -1.92
BCD1YHR040W PTI1P39927 425 aaPredicted RBP3.06□□□□□ -1.92
BCD1YHR040W YER137CP40083 148 aaKnown RBP3.06□□□□□ -1.92
BCD1YHR040W YIL086CP40503 102 aa3.06□□□□□ -1.92
BCD1YHR040W IDP2P41939 412 aa3.06□□□□□ -1.92
BCD1YHR040W DOC1P53068 250 aa3.06□□□□□ -1.92
BCD1YHR040W YGL117WP53133 265 aa3.06□□□□□ -1.92
BCD1YHR040W TPC1P53257 314 aa3.06□□□□□ -1.92
BCD1YHR040W DID2P69771 204 aa3.06□□□□□ -1.92
BCD1YHR040W YML108WQ03759 105 aa3.06□□□□□ -1.92
BCD1YHR040W RVB1Q03940 463 aaKnown RBP3.06□□□□□ -1.92
BCD1YHR040W UTP15Q04305 513 aaKnown RBP3.06□□□□□ -1.92
BCD1YHR040W TAZ1Q06510 381 aa3.06□□□□□ -1.92
BCD1YHR040W MRPL35Q06678 367 aa3.06□□□□□ -1.92
BCD1YHR040W RRI1Q12468 440 aa3.06□□□□□ -1.92
BCD1YHR040W KIN28P06242 306 aa3.05□□□□□ -1.92
BCD1YHR040W BAR1P12630 587 aa3.05□□□□□ -1.92
BCD1YHR040W ATP10P18496 279 aa3.05□□□□□ -1.92
BCD1YHR040W UTR1P21373 530 aa3.05□□□□□ -1.92
BCD1YHR040W GPI12P23797 304 aa3.05□□□□□ -1.92
BCD1YHR040W STP22P25604 385 aa3.05□□□□□ -1.92
BCD1YHR040W YCR102CP25608 368 aa3.05□□□□□ -1.92
BCD1YHR040W RFA3P26755 122 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W MRP17P28778 131 aa3.05□□□□□ -1.92
BCD1YHR040W EHD3P28817 500 aa3.05□□□□□ -1.92
BCD1YHR040W ACB1P31787 87 aa3.05□□□□□ -1.92
BCD1YHR040W PTR2P32901 601 aa3.05□□□□□ -1.92
BCD1YHR040W RPC34P32910 317 aa3.05□□□□□ -1.92
BCD1YHR040W SNC2P33328 115 aa3.05□□□□□ -1.92
BCD1YHR040W YKL070WP36087 169 aa3.05□□□□□ -1.92
BCD1YHR040W TCM62P38228 572 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W YBR096WP38256 230 aa3.05□□□□□ -1.92
BCD1YHR040W SDS24P38314 527 aa3.05□□□□□ -1.92
BCD1YHR040W MTC4P38335 694 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W LAG1P38703 411 aa3.05□□□□□ -1.92
BCD1YHR040W YHR180WP38868 163 aa3.05□□□□□ -1.92
BCD1YHR040W GPI16P38875 610 aa3.05□□□□□ -1.92
BCD1YHR040W GAT2P40209 560 aa3.05□□□□□ -1.92
BCD1YHR040W RPL13BP40212 199 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W DLS1P40366 167 aa3.05□□□□□ -1.92
BCD1YHR040W YFL015CP43578 164 aa3.05□□□□□ -1.92
BCD1YHR040W CIS3P47001 227 aa3.05□□□□□ -1.92
BCD1YHR040W YJR011CP47086 261 aaPredicted RBP3.05□□□□□ -1.92
BCD1YHR040W LYS20P48570 428 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W PHB2P50085 310 aa3.05□□□□□ -1.92
BCD1YHR040W UBC12P52491 188 aa3.05□□□□□ -1.92
BCD1YHR040W SEH1P53011 349 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W PNC1P53184 216 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W POP6P53218 158 aa3.05□□□□□ -1.92
BCD1YHR040W VHT1P53241 593 aa3.05□□□□□ -1.92
BCD1YHR040W SCW4P53334 386 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W YLR152CP54072 576 aa3.05□□□□□ -1.92
BCD1YHR040W DIG2Q03373 323 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W INP1Q03694 420 aa3.05□□□□□ -1.92
BCD1YHR040W ATC1Q04005 294 aa3.05□□□□□ -1.92
BCD1YHR040W SNX41Q04053 625 aa3.05□□□□□ -1.92
BCD1YHR040W HNT1Q04344 158 aaKnown RBP3.05□□□□□ -1.92
BCD1YHR040W COA4Q05809 96 aa3.05□□□□□ -1.92
BCD1YHR040W NNT1Q05874 261 aa3.05□□□□□ -1.92
BCD1YHR040W RRG8Q06109 277 aa3.05□□□□□ -1.92
BCD1YHR040W KEI1Q06346 221 aa3.05□□□□□ -1.92
BCD1YHR040W BSC6Q08280 497 aa3.05□□□□□ -1.92
BCD1YHR040W RDR1Q08904 546 aa3.05□□□□□ -1.92
BCD1YHR040W SRL2Q12020 392 aa3.05□□□□□ -1.92
BCD1YHR040W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
BCD1YHR040W TIR4Q12218 487 aaPredicted RBP3.05□□□□□ -1.92
BCD1YHR040W RPL13AQ12690 199 aaPredicted RBP3.05□□□□□ -1.92
BCD1YHR040W YOR032W-AQ8TGS1 66 aa3.05□□□□□ -1.92
BCD1YHR040W TAD3Q9URQ3 322 aa3.05□□□□□ -1.92
BCD1YHR040W RPL7AP05737 244 aaKnown RBP3.04□□□□□ -1.92
BCD1YHR040W ADK1P07170 222 aaKnown RBP3.04□□□□□ -1.92
BCD1YHR040W SSA3P09435 649 aaKnown RBP3.04□□□□□ -1.92
BCD1YHR040W GRX2P17695 143 aaKnown RBP3.04□□□□□ -1.92
BCD1YHR040W SUA5P32579 426 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 88.3 ms