RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W CDD1Q06549 142 aa2.14□□□□□ -2.07
SEC4YFL005W YPR172WQ06608 200 aa2.14□□□□□ -2.07
SEC4YFL005W RDS3Q06835 107 aaPredicted RBP2.14□□□□□ -2.07
SEC4YFL005W BBP1Q12365 385 aa2.14□□□□□ -2.07
SEC4YFL005W CHD1P32657 1468 aa2.14□□□□□ -2.07
SEC4YFL005W QCR6P00127 147 aa2.13□□□□□ -2.07
SEC4YFL005W SNA3P14359 133 aa2.13□□□□□ -2.07
SEC4YFL005W CCA1P21269 546 aa2.13□□□□□ -2.07
SEC4YFL005W MSA2P36157 363 aa2.13□□□□□ -2.07
SEC4YFL005W YHL026CP38740 315 aa2.13□□□□□ -2.07
SEC4YFL005W MED6P38782 295 aa2.13□□□□□ -2.07
SEC4YFL005W PRE6P40303 254 aaKnown RBP2.13□□□□□ -2.07
SEC4YFL005W MRPL49P40858 161 aaPredicted RBP2.13□□□□□ -2.07
SEC4YFL005W OTU1P43558 301 aa2.13□□□□□ -2.07
SEC4YFL005W MCM22P47167 239 aa2.13□□□□□ -2.07
SEC4YFL005W YJR146WP47174 117 aa2.13□□□□□ -2.07
SEC4YFL005W RMR1P53060 241 aa2.13□□□□□ -2.07
SEC4YFL005W YGL159WP53110 370 aa2.13□□□□□ -2.07
SEC4YFL005W INM2Q05533 292 aa2.13□□□□□ -2.07
SEC4YFL005W SUE1Q06524 206 aa2.13□□□□□ -2.07
SEC4YFL005W YLR030WQ07967 263 aa2.13□□□□□ -2.07
SEC4YFL005W VPS68Q12016 184 aa2.13□□□□□ -2.07
SEC4YFL005W IPP1P00817 287 aaKnown RBP2.12□□□□□ -2.07
SEC4YFL005W BCY1P07278 416 aaKnown RBP2.12□□□□□ -2.07
SEC4YFL005W MER1P16523 270 aa2.12□□□□□ -2.07
SEC4YFL005W CDC10P25342 322 aaKnown RBP2.12□□□□□ -2.07
SEC4YFL005W PPA2P28239 310 aa2.12□□□□□ -2.07
SEC4YFL005W VMA6P32366 345 aaKnown RBP2.12□□□□□ -2.07
SEC4YFL005W ERG24P32462 438 aaKnown RBP2.12□□□□□ -2.07
SEC4YFL005W SCM4P32564 187 aa2.12□□□□□ -2.07
SEC4YFL005W NTF2P33331 125 aaKnown RBP2.12□□□□□ -2.07
SEC4YFL005W COX15P40086 486 aa2.12□□□□□ -2.07
SEC4YFL005W ARC15P40518 154 aaRIP-Chip data2.12□□□□□ -2.07not detected
SEC4YFL005W ILM1P47155 203 aa2.12□□□□□ -2.07
SEC4YFL005W YJR149WP47177 404 aa2.12□□□□□ -2.07
SEC4YFL005W DSK2P48510 373 aa2.12□□□□□ -2.07
SEC4YFL005W GTR2P53290 341 aa2.12□□□□□ -2.07
SEC4YFL005W YPL257WQ08974 193 aa2.12□□□□□ -2.07
SEC4YFL005W THP2O13539 261 aaKnown RBP2.11□□□□□ -2.07
SEC4YFL005W Q0255P03881 472 aa2.11□□□□□ -2.07
SEC4YFL005W RHO1P06780 209 aaKnown RBP2.11□□□□□ -2.07
SEC4YFL005W SPT3P06844 337 aa2.11□□□□□ -2.07
SEC4YFL005W KSS1P14681 368 aa2.11□□□□□ -2.07
SEC4YFL005W YKT6P36015 200 aaKnown RBP2.11□□□□□ -2.07
SEC4YFL005W TRM9P49957 279 aa2.11□□□□□ -2.07
SEC4YFL005W COS6P53344 381 aa2.11□□□□□ -2.07
SEC4YFL005W SLM2P53955 656 aa2.11□□□□□ -2.07
SEC4YFL005W YMR279CQ03263 540 aa2.11□□□□□ -2.07
SEC4YFL005W DCR2Q05924 578 aa2.11□□□□□ -2.07
SEC4YFL005W YPL229WQ99395 206 aa2.11□□□□□ -2.07
SEC4YFL005W HTL1Q9URQ5 78 aa2.11□□□□□ -2.07
SEC4YFL005W ADH3P07246 375 aaKnown RBP2.1□□□□□ -2.07
SEC4YFL005W PBN1P25580 416 aa2.1□□□□□ -2.07
SEC4YFL005W SSO1P32867 290 aa2.1□□□□□ -2.07
SEC4YFL005W YHR125WP38831 101 aa2.1□□□□□ -2.07
SEC4YFL005W MSS2P40990 351 aa2.1□□□□□ -2.07
SEC4YFL005W CAT5P41735 233 aa2.1□□□□□ -2.07
SEC4YFL005W HAM1P47119 197 aaKnown RBP2.1□□□□□ -2.07
SEC4YFL005W MIC26P50087 233 aa2.1□□□□□ -2.07
SEC4YFL005W IGO1P53897 168 aa2.1□□□□□ -2.07
SEC4YFL005W MSA1Q08471 629 aa2.1□□□□□ -2.07
SEC4YFL005W COX5AP00424 153 aa2.09□□□□□ -2.07
SEC4YFL005W DSF1P0CX08 502 aa2.09□□□□□ -2.07
SEC4YFL005W YNR073CP0CX09 502 aa2.09□□□□□ -2.07
SEC4YFL005W NHP6BP11633 99 aaKnown RBP2.09□□□□□ -2.07
SEC4YFL005W YMR31P19955 123 aa2.09□□□□□ -2.07
SEC4YFL005W SCO1P23833 295 aa2.09□□□□□ -2.07
SEC4YFL005W RAD51P25454 400 aa2.09□□□□□ -2.07
SEC4YFL005W YPT52P36018 234 aaKnown RBP2.09□□□□□ -2.07
SEC4YFL005W MIC12P38341 106 aa2.09□□□□□ -2.07
SEC4YFL005W URA8P38627 578 aaPredicted RBP2.09□□□□□ -2.07
SEC4YFL005W RPF1P38805 295 aaKnown RBP2.09□□□□□ -2.07
SEC4YFL005W FIS1P40515 155 aa2.09□□□□□ -2.07
SEC4YFL005W NSA1P53136 463 aaPredicted RBP2.09□□□□□ -2.07
SEC4YFL005W YGR026WP53217 278 aa2.09□□□□□ -2.07
SEC4YFL005W RGM1Q00453 211 aa2.09□□□□□ -2.07
SEC4YFL005W CDC123Q05791 360 aa2.09□□□□□ -2.07
SEC4YFL005W TPO4Q12256 659 aa2.09□□□□□ -2.07
SEC4YFL005W ADF1Q2V2Q1 113 aa2.09□□□□□ -2.07
SEC4YFL005W YOR020W-AQ3E824 90 aa2.09□□□□□ -2.07
SEC4YFL005W SEY1Q99287 776 aa2.09□□□□□ -2.07
SEC4YFL005W SNF6P18888 332 aa2.08□□□□□ -2.08
SEC4YFL005W DOA4P32571 926 aa2.08□□□□□ -2.08
SEC4YFL005W RIB1P38066 345 aa2.08□□□□□ -2.08
SEC4YFL005W PEX17P40155 199 aa2.08□□□□□ -2.08
SEC4YFL005W YRB1P41920 201 aaKnown RBP2.08□□□□□ -2.08
SEC4YFL005W SNX4P47057 423 aa2.08□□□□□ -2.08
SEC4YFL005W TOS8P53147 276 aa2.08□□□□□ -2.08
SEC4YFL005W PGA2P53903 129 aa2.08□□□□□ -2.08
SEC4YFL005W FYV6P53913 173 aa2.08□□□□□ -2.08
SEC4YFL005W YML108WQ03759 105 aa2.08□□□□□ -2.08
SEC4YFL005W YML096WQ04489 525 aa2.08□□□□□ -2.08
SEC4YFL005W EMC6Q12431 108 aa2.08□□□□□ -2.08
SEC4YFL005W NCB2Q92317 146 aa2.08□□□□□ -2.08
SEC4YFL005W YBR121C-AP0C5L4 52 aa2.07□□□□□ -2.08
SEC4YFL005W YHR032W-AP0C5N6 59 aa2.07□□□□□ -2.08
SEC4YFL005W RTC3P38804 111 aaPredicted RBP2.07□□□□□ -2.08
SEC4YFL005W SMD3P43321 101 aaKnown RBP2.07□□□□□ -2.08
SEC4YFL005W RPA43P46669 326 aa2.07□□□□□ -2.08
SEC4YFL005W MNN5P46982 586 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms