RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C WTM1Q12363 437 aaKnown RBP2.4□□□□□ -2.03
MSH4YFL003C ADH1P00330 348 aaKnown RBP2.39□□□□□ -2.03
MSH4YFL003C DPB2P24482 689 aaPredicted RBP2.39□□□□□ -2.03
MSH4YFL003C VPS51P36116 164 aa2.39□□□□□ -2.03
MSH4YFL003C WSC4P38739 605 aa2.39□□□□□ -2.03
MSH4YFL003C PRE5P40302 234 aaKnown RBP2.39□□□□□ -2.03
MSH4YFL003C GSC2P40989 1895 aa2.39□□□□□ -2.03
MSH4YFL003C TRM9P49957 279 aa2.39□□□□□ -2.03
MSH4YFL003C COG7P53195 279 aa2.39□□□□□ -2.03
MSH4YFL003C YLR126CQ12288 251 aa2.39□□□□□ -2.03
MSH4YFL003C TUS1Q06412 1307 aa2.39□□□□□ -2.03
MSH4YFL003C ASP3-2P0CX77 362 aa2.39□□□□□ -2.03
MSH4YFL003C ASP3-3P0CX78 362 aa2.39□□□□□ -2.03
MSH4YFL003C ASP3-4P0CX79 362 aa2.39□□□□□ -2.03
MSH4YFL003C ASP3-1P0CZ17 362 aa2.39□□□□□ -2.03
MSH4YFL003C SNA3P14359 133 aa2.39□□□□□ -2.03
MSH4YFL003C YOX1P34161 385 aa2.39□□□□□ -2.03
MSH4YFL003C AST1P35183 429 aa2.39□□□□□ -2.03
MSH4YFL003C YHL049CP38722 271 aa2.39□□□□□ -2.03
MSH4YFL003C YHR127WP38833 243 aaKnown RBP2.39□□□□□ -2.03
MSH4YFL003C BMT5P40493 336 aa2.39□□□□□ -2.03
MSH4YFL003C AVT7P40501 490 aa2.39□□□□□ -2.03
MSH4YFL003C IRC18P47056 224 aa2.39□□□□□ -2.03
MSH4YFL003C MCM22P47167 239 aa2.39□□□□□ -2.03
MSH4YFL003C SNZ2P53824 298 aa2.39□□□□□ -2.03
MSH4YFL003C RHO3Q00245 231 aaKnown RBP2.39□□□□□ -2.03
MSH4YFL003C YMR244WQ04018 355 aa2.39□□□□□ -2.03
MSH4YFL003C PEX10Q05568 337 aa2.39□□□□□ -2.03
MSH4YFL003C SEI1Q06058 285 aa2.39□□□□□ -2.03
MSH4YFL003C GRE1Q08969 168 aa2.39□□□□□ -2.03
MSH4YFL003C YKR104WP0CE69 306 aa2.38□□□□□ -2.03
MSH4YFL003C RPB9P27999 122 aa2.38□□□□□ -2.03
MSH4YFL003C HEK2P38199 381 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
MSH4YFL003C EFM1P38732 585 aa2.38□□□□□ -2.03
MSH4YFL003C TRM5P38793 499 aa2.38□□□□□ -2.03
MSH4YFL003C SNZ3P43545 298 aa2.38□□□□□ -2.03
MSH4YFL003C ACT1P60010 375 aaKnown RBP2.38□□□□□ -2.03
MSH4YFL003C SPG4Q04438 115 aa2.38□□□□□ -2.03
MSH4YFL003C ECM19Q06011 112 aa2.38□□□□□ -2.03
MSH4YFL003C TPO4Q12256 659 aa2.38□□□□□ -2.03
MSH4YFL003C RAX2Q12465 1220 aa2.38□□□□□ -2.03
MSH4YFL003C BGL2P15703 313 aaKnown RBP2.38□□□□□ -2.03
MSH4YFL003C SNF6P18888 332 aa2.38□□□□□ -2.03
MSH4YFL003C PHO80P20052 293 aa2.38□□□□□ -2.03
MSH4YFL003C VPH2P32341 215 aa2.38□□□□□ -2.03
MSH4YFL003C YEL045CP32616 141 aa2.38□□□□□ -2.03
MSH4YFL003C SEN34P39707 275 aa2.38□□□□□ -2.03
MSH4YFL003C STB1P42845 420 aa2.38□□□□□ -2.03
MSH4YFL003C YFL064CP43540 174 aa2.38□□□□□ -2.03
MSH4YFL003C CPR7P47103 393 aa2.38□□□□□ -2.03
MSH4YFL003C OST3P48439 350 aa2.38□□□□□ -2.03
MSH4YFL003C FYV6P53913 173 aa2.38□□□□□ -2.03
MSH4YFL003C MRS2Q01926 470 aa2.38□□□□□ -2.03
MSH4YFL003C YPL113CQ02961 396 aa2.38□□□□□ -2.03
MSH4YFL003C HEM25Q07534 307 aa2.38□□□□□ -2.03
MSH4YFL003C RPL21BQ12672 160 aaKnown RBP2.38□□□□□ -2.03
MSH4YFL003C UTP10P42945 1769 aaKnown RBP2.38□□□□□ -2.03
MSH4YFL003C YMR316C-AI2HB70 103 aa2.38□□□□□ -2.03
MSH4YFL003C CAM1P29547 415 aaKnown RBP2.38□□□□□ -2.03
MSH4YFL003C SGE1P33335 543 aa2.38□□□□□ -2.03
MSH4YFL003C MRPL3P36516 390 aa2.38□□□□□ -2.03
MSH4YFL003C RFT1P38206 574 aaPredicted RBP2.38□□□□□ -2.03
MSH4YFL003C SHE3P38272 425 aaKnown RBP2.38□□□□□ -2.03
MSH4YFL003C POG1P40473 351 aa2.38□□□□□ -2.03
MSH4YFL003C BRR6P53062 197 aa2.38□□□□□ -2.03
MSH4YFL003C TOS8P53147 276 aa2.38□□□□□ -2.03
MSH4YFL003C YGL039WP53183 348 aaKnown RBP2.38□□□□□ -2.03
MSH4YFL003C FMP41P53889 259 aaKnown RBP2.38□□□□□ -2.03
MSH4YFL003C PIN3Q06449 215 aa2.38□□□□□ -2.03
MSH4YFL003C YDL144CQ07589 356 aa2.38□□□□□ -2.03
MSH4YFL003C YAL063C-AQ3E791 96 aa2.38□□□□□ -2.03
MSH4YFL003C SIR4P11978 1358 aa2.37□□□□□ -2.03
MSH4YFL003C COX4P04037 155 aa2.37□□□□□ -2.03
MSH4YFL003C FBA1P14540 359 aaKnown RBP2.37□□□□□ -2.03
MSH4YFL003C PPH21P23594 369 aa2.37□□□□□ -2.03
MSH4YFL003C TIP20P33891 701 aa2.37□□□□□ -2.03
MSH4YFL003C YJR141WP47172 347 aaPredicted RBP2.37□□□□□ -2.03
MSH4YFL003C RNH201P53942 307 aa2.37□□□□□ -2.03
MSH4YFL003C DXO1Q06349 442 aa2.37□□□□□ -2.03
MSH4YFL003C YPL278CQ08990 100 aa2.37□□□□□ -2.03
MSH4YFL003C SRY1P36007 326 aa2.37□□□□□ -2.03
MSH4YFL003C DRE2P36152 348 aa2.37□□□□□ -2.03
MSH4YFL003C SOL2P37262 315 aa2.37□□□□□ -2.03
MSH4YFL003C YCR087C-AP37263 153 aa2.37□□□□□ -2.03
MSH4YFL003C SUR2P38992 349 aa2.37□□□□□ -2.03
MSH4YFL003C PRP24P49960 444 aaKnown RBP2.37□□□□□ -2.03
MSH4YFL003C YGL159WP53110 370 aa2.37□□□□□ -2.03
MSH4YFL003C YIP3P53633 176 aa2.37□□□□□ -2.03
MSH4YFL003C MRX11Q03079 207 aa2.37□□□□□ -2.03
MSH4YFL003C TIR4Q12218 487 aaPredicted RBP2.37□□□□□ -2.03
MSH4YFL003C MET2P08465 486 aa2.36□□□□□ -2.03
MSH4YFL003C URA6P15700 204 aa2.36□□□□□ -2.03
MSH4YFL003C DBP7P36120 742 aaKnown RBP2.36□□□□□ -2.03
MSH4YFL003C POP8P38208 133 aa2.36□□□□□ -2.03
MSH4YFL003C IGD1P43598 195 aa2.36□□□□□ -2.03
MSH4YFL003C FMP48P53233 369 aa2.36□□□□□ -2.03
MSH4YFL003C SYF2P53277 215 aaPredicted RBP2.36□□□□□ -2.03
MSH4YFL003C YDR115WQ04598 105 aa2.36□□□□□ -2.03
MSH4YFL003C LIP2Q06005 328 aa2.36□□□□□ -2.03
MSH4YFL003C YPR147CQ06522 304 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms