RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W KEI1Q06346 221 aa5.9□□□□□ -1.46
PDA1YER178W PIN3Q06449 215 aa5.9□□□□□ -1.46
PDA1YER178W GPN3Q06543 272 aa5.9□□□□□ -1.46
PDA1YER178W MRX9Q07349 420 aaKnown RBP5.9□□□□□ -1.46
PDA1YER178W YOR097CQ12274 175 aaPredicted RBP5.9□□□□□ -1.46
PDA1YER178W EAF3Q12432 401 aa5.9□□□□□ -1.46
PDA1YER178W REP1P03871 373 aa5.89□□□□□ -1.47
PDA1YER178W RPL3P14126 387 aaKnown RBP5.89□□□□□ -1.47
PDA1YER178W TAL1P15019 335 aaKnown RBP5.89□□□□□ -1.47
PDA1YER178W HOM6P31116 359 aaKnown RBP5.89□□□□□ -1.47
PDA1YER178W NAB2P32505 525 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
PDA1YER178W VMA11P32842 164 aa5.89□□□□□ -1.47
PDA1YER178W YKL063CP35725 167 aa5.89□□□□□ -1.47
PDA1YER178W RTT105P40063 208 aa5.89□□□□□ -1.47
PDA1YER178W YFL015CP43578 164 aa5.89□□□□□ -1.47
PDA1YER178W SUT1P53032 299 aaKnown RBP5.89□□□□□ -1.47
PDA1YER178W YDR415CQ04033 374 aaPredicted RBP5.89□□□□□ -1.47
PDA1YER178W GMC1Q04399 608 aa5.89□□□□□ -1.47
PDA1YER178W YOL118CQ08259 102 aa5.89□□□□□ -1.47
PDA1YER178W YOR192C-CQ3E736 78 aa5.89□□□□□ -1.47
PDA1YER178W SUS1Q6WNK7 96 aa5.89□□□□□ -1.47
PDA1YER178W VMA3P25515 160 aa5.88□□□□□ -1.47
PDA1YER178W VMA5P31412 392 aaKnown RBP5.88□□□□□ -1.47
PDA1YER178W UTP11P34247 250 aaPredicted RBP5.88□□□□□ -1.47
PDA1YER178W ALG14P38242 237 aa5.88□□□□□ -1.47
PDA1YER178W CAT5P41735 233 aa5.88□□□□□ -1.47
PDA1YER178W GZF3P42944 551 aaKnown RBP5.88□□□□□ -1.47
PDA1YER178W YGR054WP53235 642 aaKnown RBP5.88□□□□□ -1.47
PDA1YER178W CSI2Q08054 341 aa5.88□□□□□ -1.47
PDA1YER178W YOR186WQ08560 144 aa5.88□□□□□ -1.47
PDA1YER178W FCY22Q12119 530 aa5.88□□□□□ -1.47
PDA1YER178W ERP4Q12450 207 aa5.88□□□□□ -1.47
PDA1YER178W ODC2Q99297 307 aa5.88□□□□□ -1.47
PDA1YER178W RFA1P22336 621 aaKnown RBP5.87□□□□□ -1.47
PDA1YER178W PUP1P25043 261 aa5.87□□□□□ -1.47
PDA1YER178W YBL010CP32788 280 aa5.87□□□□□ -1.47
PDA1YER178W MBA1P38300 278 aa5.87□□□□□ -1.47
PDA1YER178W YHR122WP38829 231 aa5.87□□□□□ -1.47
PDA1YER178W PIR5P46999 287 aa5.87□□□□□ -1.47
PDA1YER178W CTF19Q02732 369 aa5.87□□□□□ -1.47
PDA1YER178W TDA1Q03533 586 aa5.87□□□□□ -1.47
PDA1YER178W GRC3Q07845 632 aa5.87□□□□□ -1.47
PDA1YER178W ALG6Q12001 544 aaKnown RBP5.87□□□□□ -1.47
PDA1YER178W YOR283WQ12040 230 aaKnown RBP5.87□□□□□ -1.47
PDA1YER178W RPN13O13563 156 aa5.86□□□□□ -1.47
PDA1YER178W RPS31P05759 152 aaKnown RBP5.86□□□□□ -1.47
PDA1YER178W CHO1P08456 276 aa5.86□□□□□ -1.47
PDA1YER178W PET122P10355 254 aa5.86□□□□□ -1.47
PDA1YER178W RPL5P26321 297 aaKnown RBP5.86□□□□□ -1.47
PDA1YER178W SWD3P38123 315 aa5.86□□□□□ -1.47
PDA1YER178W HPA3P39979 161 aa5.86□□□□□ -1.47
PDA1YER178W SGN1P40561 250 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
PDA1YER178W SYS1P41544 203 aa5.86□□□□□ -1.47
PDA1YER178W IRC18P47056 224 aa5.86□□□□□ -1.47
PDA1YER178W GEP7P53171 287 aa5.86□□□□□ -1.47
PDA1YER178W WSC2P53832 503 aa5.86□□□□□ -1.47
PDA1YER178W NRG1Q03125 231 aa5.86□□□□□ -1.47
PDA1YER178W RPL25P04456 142 aaKnown RBP5.85□□□□□ -1.47
PDA1YER178W AAC1P04710 309 aa5.85□□□□□ -1.47
PDA1YER178W OCH1P31755 480 aa5.85□□□□□ -1.47
PDA1YER178W SPT14P32363 452 aa5.85□□□□□ -1.47
PDA1YER178W LNP1P38878 278 aa5.85□□□□□ -1.47
PDA1YER178W SMB1P40018 196 aaKnown RBP5.85□□□□□ -1.47
PDA1YER178W FCY21P40039 528 aa5.85□□□□□ -1.47
PDA1YER178W SER2P42941 309 aa5.85□□□□□ -1.47
PDA1YER178W MRX5P47007 382 aa5.85□□□□□ -1.47
PDA1YER178W YGL262WP53054 175 aa5.85□□□□□ -1.47
PDA1YER178W SMM1P53720 384 aaKnown RBP5.85□□□□□ -1.47
PDA1YER178W FMT1P32785 401 aa5.84□□□□□ -1.47
PDA1YER178W NAT2P37293 288 aa5.84□□□□□ -1.47
PDA1YER178W IPI1P38803 334 aaPredicted RBP5.84□□□□□ -1.47
PDA1YER178W YNR064CP53750 290 aa5.84□□□□□ -1.47
PDA1YER178W PRM15Q03262 622 aa5.84□□□□□ -1.47
PDA1YER178W YMR130WQ04223 302 aa5.84□□□□□ -1.47
PDA1YER178W YMR254CQ04838 102 aa5.84□□□□□ -1.47
PDA1YER178W SOG2Q08817 791 aa5.84□□□□□ -1.47
PDA1YER178W SPO24Q3E752 67 aa5.84□□□□□ -1.47
PDA1YER178W CYC1P00044 109 aaPredicted RBP5.83□□□□□ -1.48
PDA1YER178W URA6P15700 204 aa5.83□□□□□ -1.48
PDA1YER178W APA2P22108 325 aa5.83□□□□□ -1.48
PDA1YER178W RNP1P32385 249 aa5.83□□□□□ -1.48
PDA1YER178W ZUO1P32527 433 aaKnown RBP5.83□□□□□ -1.48
PDA1YER178W GPI18P38211 433 aa5.83□□□□□ -1.48
PDA1YER178W CCS1P40202 249 aaKnown RBP5.83□□□□□ -1.48
PDA1YER178W YHC3P47040 408 aa5.83□□□□□ -1.48
PDA1YER178W HNT1Q04344 158 aaKnown RBP5.83□□□□□ -1.48
PDA1YER178W YMR317WQ04893 1140 aa5.83□□□□□ -1.48
PDA1YER178W TMA10Q06177 86 aa5.83□□□□□ -1.48
PDA1YER178W PHO92Q06390 306 aa5.83□□□□□ -1.48
PDA1YER178W ENV7Q12003 364 aa5.83□□□□□ -1.48
PDA1YER178W RFM1Q12192 310 aa5.83□□□□□ -1.48
PDA1YER178W YDL009CQ12210 107 aa5.83□□□□□ -1.48
PDA1YER178W YER145C-AA0A023PYF4 145 aa5.82□□□□□ -1.48
PDA1YER178W TDH2P00358 332 aaKnown RBP5.82□□□□□ -1.48
PDA1YER178W SEN2P16658 377 aa5.82□□□□□ -1.48
PDA1YER178W YCP4P25349 247 aaKnown RBP5.82□□□□□ -1.48
PDA1YER178W ATG22P25568 528 aa5.82□□□□□ -1.48
PDA1YER178W BUD23P25627 275 aaPredicted RBP5.82□□□□□ -1.48
PDA1YER178W ERG3P32353 365 aa5.82□□□□□ -1.48
PDA1YER178W MRPL27P36526 146 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms