RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeastyeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRB1YEL060C MDH3P32419 343 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
PRB1YEL060C ISF1P32488 338 aa6.5□□□□□ -1.37
PRB1YEL060C MTC7P32633 139 aa6.5□□□□□ -1.37
PRB1YEL060C TIM12P32830 109 aa6.5□□□□□ -1.37
PRB1YEL060C TRS20P38334 175 aa6.5□□□□□ -1.37
PRB1YEL060C NAS2P40555 220 aa6.5□□□□□ -1.37
PRB1YEL060C SEH1P53011 349 aaKnown RBP6.5□□□□□ -1.37
PRB1YEL060C YGL262WP53054 175 aa6.5□□□□□ -1.37
PRB1YEL060C SLX9P53251 210 aaPredicted RBP6.5□□□□□ -1.37
PRB1YEL060C SNP1Q00916 300 aaPredicted RBP6.5□□□□□ -1.37
PRB1YEL060C CAB5Q03941 241 aa6.5□□□□□ -1.37
PRB1YEL060C SRO7Q12038 1033 aa6.5□□□□□ -1.37
PRB1YEL060C FYV7Q12247 151 aa6.5□□□□□ -1.37
PRB1YEL060C AGC1Q12482 902 aa6.5□□□□□ -1.37
PRB1YEL060C RIP1P08067 215 aa6.49□□□□□ -1.37
PRB1YEL060C MET3P08536 511 aa6.49□□□□□ -1.37
PRB1YEL060C EHD3P28817 500 aa6.49□□□□□ -1.37
PRB1YEL060C YKL069WP36088 180 aa6.49□□□□□ -1.37
PRB1YEL060C RPP1P38786 293 aa6.49□□□□□ -1.37
PRB1YEL060C IRC24P40580 263 aa6.49□□□□□ -1.37
PRB1YEL060C ASK10P48361 1146 aa6.49□□□□□ -1.37
PRB1YEL060C TAF4P50105 388 aa6.49□□□□□ -1.37
PRB1YEL060C VEL1P53058 206 aa6.49□□□□□ -1.37
PRB1YEL060C SCW4P53334 386 aaKnown RBP6.49□□□□□ -1.37
PRB1YEL060C OGG1P53397 376 aaPredicted RBP6.49□□□□□ -1.37
PRB1YEL060C TEX1P53851 422 aaKnown RBP6.49□□□□□ -1.37
PRB1YEL060C SAM50P53969 484 aa6.49□□□□□ -1.37
PRB1YEL060C YDR248CQ03786 193 aa6.49□□□□□ -1.37
PRB1YEL060C ASM4Q05166 528 aa6.49□□□□□ -1.37
PRB1YEL060C TDA6Q06466 467 aa6.49□□□□□ -1.37
PRB1YEL060C YPL272CQ08984 517 aa6.49□□□□□ -1.37
PRB1YEL060C YOR114WQ12219 294 aa6.49□□□□□ -1.37
PRB1YEL060C PAU19P0CE85 124 aa6.48□□□□□ -1.37
PRB1YEL060C PAU21P0CE86 164 aa6.48□□□□□ -1.37
PRB1YEL060C PAU22P0CE87 164 aa6.48□□□□□ -1.37
PRB1YEL060C PAU3P25610 124 aa6.48□□□□□ -1.37
PRB1YEL060C SEF1P34228 1148 aa6.48□□□□□ -1.37
PRB1YEL060C SPT23P35210 1082 aa6.48□□□□□ -1.37
PRB1YEL060C MRPS9P38120 278 aa6.48□□□□□ -1.37
PRB1YEL060C YEA4P40004 342 aa6.48□□□□□ -1.37
PRB1YEL060C CIN5P40917 295 aa6.48□□□□□ -1.37
PRB1YEL060C IKS1P47042 667 aa6.48□□□□□ -1.37
PRB1YEL060C PDR16P53860 351 aaKnown RBP6.48□□□□□ -1.37
PRB1YEL060C YOR015WQ12169 119 aa6.48□□□□□ -1.37
PRB1YEL060C MMP1Q12372 583 aa6.48□□□□□ -1.37
PRB1YEL060C NRP1P32770 719 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
PRB1YEL060C SLC1P33333 303 aa6.48□□□□□ -1.37
PRB1YEL060C OAR1P35731 278 aa6.48□□□□□ -1.37
PRB1YEL060C SKN7P38889 622 aa6.48□□□□□ -1.37
PRB1YEL060C UIP3P39547 235 aa6.48□□□□□ -1.37
PRB1YEL060C RPL13BP40212 199 aaKnown RBP6.48□□□□□ -1.37
PRB1YEL060C AIR1P40507 360 aaKnown RBP6.48□□□□□ -1.37
PRB1YEL060C OST3P48439 350 aa6.48□□□□□ -1.37
PRB1YEL060C ATC1Q04005 294 aa6.48□□□□□ -1.37
PRB1YEL060C SRL2Q12020 392 aa6.48□□□□□ -1.37
PRB1YEL060C VAM3Q12241 283 aa6.48□□□□□ -1.37
PRB1YEL060C RPL13AQ12690 199 aaPredicted RBP6.48□□□□□ -1.37
PRB1YEL060C SPC29P33419 253 aa6.47□□□□□ -1.37
PRB1YEL060C YOR062CP36025 268 aa6.47□□□□□ -1.37
PRB1YEL060C MRPL11P36521 249 aaPredicted RBP6.47□□□□□ -1.37
PRB1YEL060C PTC7P38797 343 aa6.47□□□□□ -1.37
PRB1YEL060C PHS1P40857 217 aa6.47□□□□□ -1.37
PRB1YEL060C SMK1P41808 388 aa6.47□□□□□ -1.37
PRB1YEL060C INP1Q03694 420 aa6.47□□□□□ -1.37
PRB1YEL060C OPI10Q08202 246 aa6.47□□□□□ -1.37
PRB1YEL060C YCT1Q12235 531 aa6.47□□□□□ -1.37
PRB1YEL060C YDL085C-AQ3E7B7 68 aaKnown RBP6.47□□□□□ -1.37
PRB1YEL060C QCR2P07257 368 aa6.46□□□□□ -1.37
PRB1YEL060C SGA1P08019 549 aa6.46□□□□□ -1.37
PRB1YEL060C ATP5P09457 212 aa6.46□□□□□ -1.37
PRB1YEL060C CKA1P15790 372 aa6.46□□□□□ -1.37
PRB1YEL060C ATG15P25641 520 aa6.46□□□□□ -1.37
PRB1YEL060C YKL071WP36086 256 aa6.46□□□□□ -1.37
PRB1YEL060C ARC40P38328 384 aaKnown RBP6.46□□□□□ -1.37
PRB1YEL060C LTP1P40347 161 aa6.46□□□□□ -1.37
PRB1YEL060C BUD8P41698 603 aa6.46□□□□□ -1.37
PRB1YEL060C YDL183CP48569 320 aa6.46□□□□□ -1.37
PRB1YEL060C SMM1P53720 384 aaKnown RBP6.46□□□□□ -1.37
PRB1YEL060C YNR061CP53747 219 aa6.46□□□□□ -1.37
PRB1YEL060C MRX8Q05473 314 aa6.46□□□□□ -1.37
PRB1YEL060C XYL2Q07993 356 aa6.46□□□□□ -1.37
PRB1YEL060C YOL073CQ08232 322 aa6.46□□□□□ -1.37
PRB1YEL060C YDR524C-BQ3E6R4 66 aa6.46□□□□□ -1.37
PRB1YEL060C RPS13P05756 151 aaKnown RBP6.46□□□□□ -1.38
PRB1YEL060C CPR2P23285 205 aa6.46□□□□□ -1.38
PRB1YEL060C YJU3P28321 313 aa6.46□□□□□ -1.38
PRB1YEL060C ERG3P32353 365 aa6.46□□□□□ -1.38
PRB1YEL060C ALK2P32789 676 aaPredicted RBP6.46□□□□□ -1.38
PRB1YEL060C WSS1P38838 269 aa6.46□□□□□ -1.38
PRB1YEL060C GAT2P40209 560 aa6.46□□□□□ -1.38
PRB1YEL060C GLC8P41818 229 aa6.46□□□□□ -1.38
PRB1YEL060C NSA1P53136 463 aaPredicted RBP6.46□□□□□ -1.38
PRB1YEL060C YNR066CP53752 436 aa6.46□□□□□ -1.38
PRB1YEL060C ALG9P53868 555 aaKnown RBP6.46□□□□□ -1.38
PRB1YEL060C YLR152CP54072 576 aa6.46□□□□□ -1.38
PRB1YEL060C RPC11Q04307 110 aaPredicted RBP6.46□□□□□ -1.38
PRB1YEL060C ECM18Q04623 453 aa6.46□□□□□ -1.38
PRB1YEL060C MCT1Q12283 360 aa6.46□□□□□ -1.38
PRB1YEL060C ISA2Q12425 185 aa6.46□□□□□ -1.38
PRB1YEL060C IZH2Q12442 317 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms