RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W SNU23Q12368 194 aaPredicted RBP3.37□□□□□ -1.87
SPT3YDR392W KIN28P06242 306 aa3.36□□□□□ -1.87
SPT3YDR392W YGL041W-AP0C5N3 154 aa3.36□□□□□ -1.87
SPT3YDR392W SAR1P20606 190 aaKnown RBP3.36□□□□□ -1.87
SPT3YDR392W PEX3P28795 441 aa3.36□□□□□ -1.87
SPT3YDR392W NUP2P32499 720 aa3.36□□□□□ -1.87
SPT3YDR392W PDX3P38075 228 aaKnown RBP3.36□□□□□ -1.87
SPT3YDR392W ECM31P38122 312 aa3.36□□□□□ -1.87
SPT3YDR392W SSH1P38353 490 aaKnown RBP3.36□□□□□ -1.87
SPT3YDR392W ISC1P40015 477 aaKnown RBP3.36□□□□□ -1.87
SPT3YDR392W LCP5P40079 357 aaPredicted RBP3.36□□□□□ -1.87
SPT3YDR392W LSM1P47017 172 aaKnown RBP3.36□□□□□ -1.87
SPT3YDR392W LIA1P47120 325 aaKnown RBP3.36□□□□□ -1.87
SPT3YDR392W PEX10Q05568 337 aa3.36□□□□□ -1.87
SPT3YDR392W FEX1Q08913 375 aa3.36□□□□□ -1.87
SPT3YDR392W YLR053CQ12026 108 aa3.36□□□□□ -1.87
SPT3YDR392W YOR029WQ12243 111 aa3.36□□□□□ -1.87
SPT3YDR392W MCT1Q12283 360 aa3.36□□□□□ -1.87
SPT3YDR392W HMS1Q12398 434 aa3.36□□□□□ -1.87
SPT3YDR392W ATG31Q12421 196 aa3.36□□□□□ -1.87
SPT3YDR392W YMR105W-AQ8TGS8 64 aa3.36□□□□□ -1.87
SPT3YDR392W TDH2P00358 332 aaKnown RBP3.35□□□□□ -1.87
SPT3YDR392W TDH3P00359 332 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
SPT3YDR392W MRP13P12686 339 aa3.35□□□□□ -1.87
SPT3YDR392W RAD14P28519 371 aa3.35□□□□□ -1.87
SPT3YDR392W TFC1P32367 649 aa3.35□□□□□ -1.87
SPT3YDR392W RPS1AP33442 255 aaKnown RBP3.35□□□□□ -1.87
SPT3YDR392W CPR5P35176 225 aa3.35□□□□□ -1.87
SPT3YDR392W YPK3P38070 525 aa3.35□□□□□ -1.87
SPT3YDR392W UTP9P38882 575 aaKnown RBP3.35□□□□□ -1.87
SPT3YDR392W BFR1P38934 470 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
SPT3YDR392W YMR134WP40207 237 aa3.35□□□□□ -1.87
SPT3YDR392W FAR3P46671 204 aa3.35□□□□□ -1.87
SPT3YDR392W DIE2P50076 525 aa3.35□□□□□ -1.87
SPT3YDR392W COG5P53951 403 aa3.35□□□□□ -1.87
SPT3YDR392W RPL22BP56628 122 aaKnown RBP3.35□□□□□ -1.87
SPT3YDR392W MEH1Q02205 184 aa3.35□□□□□ -1.87
SPT3YDR392W SMP3Q04174 516 aa3.35□□□□□ -1.87
SPT3YDR392W YMR027WQ04371 470 aa3.35□□□□□ -1.87
SPT3YDR392W YPR195CQ06594 109 aa3.35□□□□□ -1.87
SPT3YDR392W FEX2Q08991 375 aa3.35□□□□□ -1.87
SPT3YDR392W YBR298C-AQ8TGK4 73 aa3.35□□□□□ -1.87
SPT3YDR392W MET17P06106 444 aa3.34□□□□□ -1.87
SPT3YDR392W ASF2P32448 525 aaPredicted RBP3.34□□□□□ -1.87
SPT3YDR392W YBL010CP32788 280 aa3.34□□□□□ -1.87
SPT3YDR392W TRS65P32893 560 aa3.34□□□□□ -1.87
SPT3YDR392W UTP30P36144 274 aaKnown RBP3.34□□□□□ -1.87
SPT3YDR392W MRPL17P36528 281 aa3.34□□□□□ -1.87
SPT3YDR392W RIM2P38127 377 aa3.34□□□□□ -1.87
SPT3YDR392W YBR032WP38223 100 aa3.34□□□□□ -1.87
SPT3YDR392W MSG5P38590 489 aa3.34□□□□□ -1.87
SPT3YDR392W RRF1P38771 230 aa3.34□□□□□ -1.87
SPT3YDR392W SSO2P39926 295 aa3.34□□□□□ -1.87
SPT3YDR392W YNL200CP40165 246 aaKnown RBP3.34□□□□□ -1.87
SPT3YDR392W AIF1P52923 378 aa3.34□□□□□ -1.87
SPT3YDR392W YNL234WP53857 426 aa3.34□□□□□ -1.87
SPT3YDR392W MRPL13Q02204 264 aa3.34□□□□□ -1.87
SPT3YDR392W SNZ1Q03148 297 aa3.34□□□□□ -1.87
SPT3YDR392W GPA2P10823 449 aa3.33□□□□□ -1.88
SPT3YDR392W SNF4P12904 322 aa3.33□□□□□ -1.88
SPT3YDR392W FBA1P14540 359 aaKnown RBP3.33□□□□□ -1.88
SPT3YDR392W RVS161P25343 265 aaKnown RBP3.33□□□□□ -1.88
SPT3YDR392W ALK2P32789 676 aaPredicted RBP3.33□□□□□ -1.88
SPT3YDR392W SRO77P38163 1010 aa3.33□□□□□ -1.88
SPT3YDR392W ECM33P38248 429 aaKnown RBP3.33□□□□□ -1.88
SPT3YDR392W END3P39013 349 aa3.33□□□□□ -1.88
SPT3YDR392W MTW1P39731 289 aa3.33□□□□□ -1.88
SPT3YDR392W THO1P40040 218 aaKnown RBP3.33□□□□□ -1.88
SPT3YDR392W RPR2P40571 144 aa3.33□□□□□ -1.88
SPT3YDR392W GAB1P41733 394 aa3.33□□□□□ -1.88
SPT3YDR392W BNA7Q04066 261 aa3.33□□□□□ -1.88
SPT3YDR392W SPO77Q06134 477 aa3.33□□□□□ -1.88
SPT3YDR392W DTD1Q07648 150 aaKnown RBP3.33□□□□□ -1.88
SPT3YDR392W FMP16Q12497 93 aa3.33□□□□□ -1.88
SPT3YDR392W YOL162WP0CF19 215 aa3.32□□□□□ -1.88
SPT3YDR392W DSF1P0CX08 502 aa3.32□□□□□ -1.88
SPT3YDR392W YNR073CP0CX09 502 aa3.32□□□□□ -1.88
SPT3YDR392W RAP1P11938 827 aa3.32□□□□□ -1.88
SPT3YDR392W BGL2P15703 313 aaKnown RBP3.32□□□□□ -1.88
SPT3YDR392W CBF1P17106 351 aa3.32□□□□□ -1.88
SPT3YDR392W PTP2P29461 750 aa3.32□□□□□ -1.88
SPT3YDR392W VMA6P32366 345 aaKnown RBP3.32□□□□□ -1.88
SPT3YDR392W ARP2P32381 391 aaKnown RBP3.32□□□□□ -1.88
SPT3YDR392W TEF4P36008 412 aaKnown RBP3.32□□□□□ -1.88
SPT3YDR392W GOS1P38736 223 aa3.32□□□□□ -1.88
SPT3YDR392W RTT105P40063 208 aa3.32□□□□□ -1.88
SPT3YDR392W JLP2P40206 208 aa3.32□□□□□ -1.88
SPT3YDR392W BMT5P40493 336 aa3.32□□□□□ -1.88
SPT3YDR392W YJL213WP40896 331 aa3.32□□□□□ -1.88
SPT3YDR392W EFM3P47163 339 aa3.32□□□□□ -1.88
SPT3YDR392W GPI1P53306 609 aa3.32□□□□□ -1.88
SPT3YDR392W BIO4P53630 237 aa3.32□□□□□ -1.88
SPT3YDR392W GOR1P53839 350 aa3.32□□□□□ -1.88
SPT3YDR392W RMI1Q02685 241 aa3.32□□□□□ -1.88
SPT3YDR392W YMR010WQ03687 405 aa3.32□□□□□ -1.88
SPT3YDR392W YDR114CQ04597 100 aa3.32□□□□□ -1.88
SPT3YDR392W VPS74Q06385 345 aa3.32□□□□□ -1.88
SPT3YDR392W SNX3Q08826 162 aaKnown RBP3.32□□□□□ -1.88
SPT3YDR392W DCP1Q12517 231 aaPredicted RBP3.32□□□□□ -1.88
SPT3YDR392W CMC2Q3E7A4 109 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms